Description : component *(SPT20/ADA5) of SAGA transcription co-activator complex & original description: none
Gene families : OG0002206 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002206_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G72390 | No alias | CONTAINS InterPro DOMAIN/s: Spt20 family... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g085780 | No alias | component *(SPT20/ADA5) of SAGA transcription... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g02622 | No alias | component *(SPT20/ADA5) of SAGA transcription... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g38242 | No alias | component *(SPT20/ADA5) of SAGA transcription... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.13G072900.1 | Ceric.13G072900 | component *(SPT20/ADA5) of SAGA transcription... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01016716001 | No alias | RNA biosynthesis.RNA polymerase II-dependent... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g02860.1 | LOC_Os01g02860 | component SPT20/ADA5 of SAGA transcription co-activator complex | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g13242 | No alias | component *(SPT20/ADA5) of SAGA transcription... | 0.04 | OrthoFinder output from all 47 species | |
| MA_114383g0010 | No alias | component SPT20/ADA5 of SAGA transcription co-activator complex | 0.02 | OrthoFinder output from all 47 species | |
| MA_911375g0010 | No alias | component SPT20/ADA5 of SAGA transcription co-activator complex | 0.05 | OrthoFinder output from all 47 species | |
| Mp2g19910.1 | No alias | component SPT20/ADA5 of SAGA transcription co-activator complex | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g37205 | No alias | component *(SPT20/ADA5) of SAGA transcription... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g07983 | No alias | component *(SPT20/ADA5) of SAGA transcription... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc06g063010.4.1 | Solyc06g063010 | component SPT20/ADA5 of SAGA transcription co-activator complex | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g49888 | No alias | component *(SPT20/ADA5) of SAGA transcription... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g27177 | No alias | component *(SPT20/ADA5) of SAGA transcription... | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003729 | mRNA binding | IEP | HCCA |
| MF | GO:0004000 | adenosine deaminase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
| MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | HCCA |
| MF | GO:0016814 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | IEP | HCCA |
| MF | GO:0016835 | carbon-oxygen lyase activity | IEP | HCCA |
| MF | GO:0016836 | hydro-lyase activity | IEP | HCCA |
| MF | GO:0019239 | deaminase activity | IEP | HCCA |
| MF | GO:0031072 | heat shock protein binding | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| CC | GO:0035145 | exon-exon junction complex | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0046907 | intracellular transport | IEP | HCCA |
| MF | GO:0051082 | unfolded protein binding | IEP | HCCA |
| BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| No external refs found! |
