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  5. Dac_g42479

Dac_g42479 (ATICE1, ICE1, SCRM)


Aliases : ATICE1, ICE1, SCRM

Description : bHLH-type transcription factor & original description: none


Gene families : OG0000267 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000267_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g42479
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
Ala_g33297 ATBHLH029,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68480 ATBHLH029,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene03790.t1 Aspi01Gene03790 bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene06511.t1 Aspi01Gene06511 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g007559 SCRM2, ICE2 bHLH-type transcription factor & original description: CDS=1-894 0.03 OrthoFinder output from all 47 species
Ceric.13G011000.1 Ceric.13G011000 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.20G044100.1 Ceric.20G044100 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.20G044600.1 Ceric.20G044600 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.20G064100.1 Ceric.20G064100 bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
LOC_Os04g23550.1 LOC_Os04g23550 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_110122g0010 AMS transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_126263g0010 AMS transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_16489g0010 No alias transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_28638g0010 No alias transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_387150g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_666536g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_780853g0010 ATBHLH029,... transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_878287g0010 No alias transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Mp2g07150.1 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Ore_g41594 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0030.g010285 No alias bHLH-type transcription factor & original description: CDS=1-1623 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0109.g020579 No alias bHLH-type transcription factor & original description: CDS=1-1245 0.03 OrthoFinder output from all 47 species
Solyc05g014590.3.1 Solyc05g014590 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Solyc06g051550.4.1 ATBHLH029,... transcription factor (bHLH). iron uptake transcription factor FIT 0.03 OrthoFinder output from all 47 species
Tin_g09430 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21351 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g43403 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e040186_P002 Zm00001e040186 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e040732_P001 ATBHLH029,... transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 241 283
No external refs found!