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  5. Dac_g42950

Dac_g42950 (AGO1)


Aliases : AGO1

Description : not classified & original description: none


Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g42950

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00171410 AGO7, ZIP,... Protein argonaute 7 OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
AMTR_s00040p00171480 AGO7, ZIP,... Protein argonaute 7 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Adi_g013023 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.03 OrthoFinder output from all 47 species
Adi_g049547 AGO1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g061052 AGO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14664 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.04 OrthoFinder output from all 47 species
Aspi01Gene29180.t1 AGO1, Aspi01Gene29180 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.05 OrthoFinder output from all 47 species
Aspi01Gene59574.t1 AGO1, Aspi01Gene59574 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
Aspi01Gene61220.t1 AGO1, Aspi01Gene61220 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene68511.t1 AGO1, Aspi01Gene68511 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
Dde_g28524 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
Ehy_g05037 PNH, AGO10, ZLL not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g10197 AGO7, ZIP not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g05079 AGO7, ZIP not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g27914 AGO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEP HCCA
InterPro domains Description Start Stop
IPR032474 Argonaute_N 3 51
IPR014811 ArgoL1 61 112
IPR003100 PAZ_dom 118 192
No external refs found!