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  5. Dac_g42997

Dac_g42997 (CRR22)


Aliases : CRR22

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g42997
Cluster HCCA: Cluster_135

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00032470 No alias Pentatricopeptide repeat-containing protein At1g25360... 0.02 OrthoFinder output from all 47 species
AMTR_s00011p00266560 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.02 OrthoFinder output from all 47 species
AMTR_s00039p00210570 EMB2758 Pentatricopeptide repeat-containing protein At3g12770... 0.02 OrthoFinder output from all 47 species
Adi_g003810 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g019759 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g023974 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g059315 SLO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g061031 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g066134 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099164 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g116035 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13433 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13481 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16835 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17004 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g22600 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g23769 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25601 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g35746 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g03223 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04452 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05088 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06074 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06307 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07129 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07213 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07384 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19798 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30595 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55234 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g62734 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g06038 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g16798 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27221 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27311 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27610 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27910 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g28242 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28685 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g34218 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37980 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g62402 OSB3 cofactor of plastid-encoded RNA polymerase *(TAC9) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene18687.t1 Aspi01Gene18687 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18986.t1 MEF21, Aspi01Gene18986 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene70790.t1 Aspi01Gene70790 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0027.g023505 No alias not classified & original description: CDS=32-2620 0.02 OrthoFinder output from all 47 species
Azfi_s0045.g030112 No alias not classified & original description: CDS=94-318 0.02 OrthoFinder output from all 47 species
Azfi_s0136.g050953 No alias not classified & original description: CDS=1-2220 0.03 OrthoFinder output from all 47 species
Cba_g04666 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07299 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20824 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34536 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g37478 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.29G017400.1 Ceric.29G017400 not classified & original description: pacid=50625928... 0.03 OrthoFinder output from all 47 species
Ceric.29G039600.1 Ceric.29G039600 not classified & original description: pacid=50625761... 0.03 OrthoFinder output from all 47 species
Ceric.32G057100.1 Ceric.32G057100 not classified & original description: pacid=50598475... 0.03 OrthoFinder output from all 47 species
Dcu_g06501 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07150 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08305 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g16658 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16948 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g26238 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g38523 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06009 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06075 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g10023 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13211 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g24574 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01021403001 No alias Pentatricopeptide repeat-containing protein At3g14730... 0.02 OrthoFinder output from all 47 species
Len_g07224 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18191 OTP86 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18318 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26572 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g58768 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05604 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06697 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06715 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07396 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g16815 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g19736 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33303 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g36746 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g11358 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g22641 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g27109 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31086 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06769 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g26310 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g28656 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02309 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02310 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13570 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g18895 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57539 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57720 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03120 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05345 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06968 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39236 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53728 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g62370 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005517 CRR22 not classified & original description: CDS=1-2004 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011866 No alias not classified & original description: CDS=1-2421 0.03 OrthoFinder output from all 47 species
Sam_g07845 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g09072 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g15563 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g22188 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35987 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g094480.4.1 Solyc02g094480 RNA editing factor (MEF14) 0.03 OrthoFinder output from all 47 species
Solyc04g079410.3.1 Solyc04g079410 ssDNA-binding protein (OSB) 0.02 OrthoFinder output from all 47 species
Solyc09g090440.1.1 LPA66, Solyc09g090440 Pentatricopeptide repeat-containing protein At5g66520... 0.02 OrthoFinder output from all 47 species
Tin_g25647 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g28785 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g44078 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e041694_P001 Zm00001e041694 Pentatricopeptide repeat-containing protein At5g16860... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 510 558
IPR002885 Pentatricopeptide_repeat 484 505
IPR002885 Pentatricopeptide_repeat 280 302
IPR002885 Pentatricopeptide_repeat 382 404
IPR002885 Pentatricopeptide_repeat 178 200
IPR046848 E_motif 631 677
IPR002885 Pentatricopeptide_repeat 102 148
IPR002885 Pentatricopeptide_repeat 408 454
IPR002885 Pentatricopeptide_repeat 203 250
IPR002885 Pentatricopeptide_repeat 305 353
No external refs found!