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  5. Dac_g43354

Dac_g43354 (ABCB19, ATABCB19,...)


Aliases : ABCB19, ATABCB19, MDR1, MDR11, ATPGP19, ATMDR1, ATMDR11, PGP19

Description : not classified & original description: none


Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g43354
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00254310 ABCB19,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
AMTR_s00055p00102180 ABCB14,... Solute transport.primary active transport.ABC... 0.05 OrthoFinder output from all 47 species
AT5G46540 PGP7 P-glycoprotein 7 0.02 OrthoFinder output from all 47 species
Aev_g20043 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g15212 PGP13 subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Als_g05763 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07510 PGP11 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07511 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09585 PGP10 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18810 PGP2 subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Als_g18811 PGP11 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g14003 PGP2 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene12320.t2 PGP2, Aspi01Gene12320 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene20594.t1 PGP20, Aspi01Gene20594 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene20595.t1 PGP20, Aspi01Gene20595 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene62054.t1 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene62055.t1 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0002.g001271 ABCB19,... subfamily ABCB transporter & original description: CDS=82-3879 0.02 OrthoFinder output from all 47 species
Azfi_s0006.g010080 PGP2 subfamily ABCB transporter & original description: CDS=691-4485 0.02 OrthoFinder output from all 47 species
Azfi_s0039.g026389 PGP11 subfamily ABCB transporter & original description: CDS=323-4378 0.01 OrthoFinder output from all 47 species
Azfi_s0099.g044118 PGP20 subfamily ABCB transporter & original description: CDS=2010-6257 0.06 OrthoFinder output from all 47 species
Azfi_s2496.g111845 ABCB19,... subfamily ABCB transporter & original description: CDS=142-3066 0.01 OrthoFinder output from all 47 species
Cba_g38324 ABCB19,... subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.36G025500.1 PGP2, Ceric.36G025500 subfamily ABCB transporter & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g14063 PGP11 subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g17218 ABCB19,... not classified & original description: none 0.11 OrthoFinder output from all 47 species
Ehy_g28462 PGP2 subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Gb_08702 No alias subfamily ABCB transporter 0.08 OrthoFinder output from all 47 species
LOC_Os01g34970.1 PGP11, LOC_Os01g34970 subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
Len_g12070 PGP13 subfamily ABCB transporter & original description: none 0.06 OrthoFinder output from all 47 species
Len_g23455 PGP11 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Len_g55573 ATPGP4, PGP4, ABCB4, MDR4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_1824g0020 No alias subfamily ABCB transporter 0.06 OrthoFinder output from all 47 species
MA_8590327g0010 No alias ABC transporter B family member 17 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Mp2g02910.1 ABCB19,... auxin efflux transporter (ABCB19). subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Mp5g17400.1 ABCB19,... subfamily ABCB transporter 0.01 OrthoFinder output from all 47 species
Mp7g04390.1 ATPGP4, PGP4, ABCB4, MDR4 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Msp_g14678 ABCB19,... subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g35589 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29224 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g60298 PGP2 subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0080.g017899 PGP11 subfamily ABCB transporter & original description: CDS=362-4450 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0080.g017905 PGP11 not classified & original description: CDS=139-861 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0111.g020710 ABCB19,... not classified & original description: CDS=1-1380 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0141.g022750 PGP11 subfamily ABCB transporter & original description: CDS=1-3756 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0214.g026004 No alias subfamily ABCB transporter & original description: CDS=930-4592 0.01 OrthoFinder output from all 47 species
Smo230688 ABCB19,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Smo410515 ABCB19,... Solute transport.primary active transport.ABC... 0.01 OrthoFinder output from all 47 species
Smo99885 No alias Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Solyc02g087870.3.1 ABCB19,... auxin efflux transporter (ABCB19). subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Solyc06g009280.1.1 PGP11, Solyc06g009280 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Solyc11g067300.2.1 PGP11, Solyc11g067300 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Spa_g08601 PGP11 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06701 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003866_P001 PGP1, ABCB1,... subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Zm00001e014797_P002 Zm00001e014797 subfamily ABCB transporter 0.01 OrthoFinder output from all 47 species
Zm00001e017444_P002 PGP21, Zm00001e017444 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Zm00001e023274_P001 PGP2, Zm00001e023274 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 16 70
No external refs found!