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  5. Dac_g44189

Dac_g44189 (ATATM1, ATM1)


Aliases : ATATM1, ATM1

Description : subfamily ABCB transporter & original description: none


Gene families : OG0002075 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002075_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g44189
Cluster HCCA: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
AT5G58270 ATATM3, STA1, ATM3 ABC transporter of the mitochondrion 3 0.01 OrthoFinder output from all 47 species
Aev_g11140 ATATM1, ATM1 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Cre12.g561550 ATATM3, STA1, ATM3 Solute transport.primary active transport.ABC... 0.01 OrthoFinder output from all 47 species
Cre13.g604150 ATATM3, STA1, ATM3 ABC transporter B family member 25, mitochondrial... 0.04 OrthoFinder output from all 47 species
Dde_g08178 ATATM1, ATM1 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os06g03770.1 ATATM3, STA1,... transport protein ATM of mitochondrial ISC system export... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004594 pantothenate kinase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
BP GO:0015936 coenzyme A metabolic process IEP HCCA
BP GO:0015937 coenzyme A biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 166 444
IPR003439 ABC_transporter-like_ATP-bd 506 655
No external refs found!