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  5. Dac_g44494

Dac_g44494


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g44494
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
Aev_g37527 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g02596 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06307 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19219 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21288 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26632 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33141 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g33170 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55326 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g57869 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g07964 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g09923 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g32957 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g36878 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g05733 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09867 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20313 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68127 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g70598 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0130.g049076 No alias not classified & original description: CDS=1-1890 0.03 OrthoFinder output from all 47 species
Cba_g05246 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g13797 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19911 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20506 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20865 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g36659 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G058800.1 Ceric.01G058800 not classified & original description: pacid=50591781... 0.02 OrthoFinder output from all 47 species
Ceric.13G069100.1 CRR22, Ceric.13G069100 not classified & original description: pacid=50635982... 0.04 OrthoFinder output from all 47 species
Ceric.14G006100.1 Ceric.14G006100 not classified & original description: pacid=50634395... 0.04 OrthoFinder output from all 47 species
Ceric.27G069000.1 Ceric.27G069000 not classified & original description: pacid=50605685... 0.03 OrthoFinder output from all 47 species
Ceric.28G052000.1 OTP86, Ceric.28G052000 not classified & original description: pacid=50569960... 0.02 OrthoFinder output from all 47 species
Ceric.31G066800.1 Ceric.31G066800 not classified & original description: pacid=50573808... 0.03 OrthoFinder output from all 47 species
Dac_g45763 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08935 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11166 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g33764 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g44847 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g45907 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g02370 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21648 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22526 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g39554 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g23831 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os04g43430.2 LOC_Os04g43430 RNA editing factor (MEF12) 0.04 OrthoFinder output from all 47 species
Len_g03390 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04842 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g10356 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04178 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07397 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07723 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g04404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14416 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g17145 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g18814 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g19490 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28799 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31071 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45671 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g45879 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45902 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06302 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g10123 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25822 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g05174 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06896 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12598 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g12602 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12604 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13547 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g56906 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57693 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57697 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57993 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57995 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63866 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g64859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07419 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07606 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g10326 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11120 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16643 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18663 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g21699 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g36021 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g36024 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g40990 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g41025 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53959 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g56822 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g57859 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59338 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59354 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g62370 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007051 CRR22 not classified & original description: CDS=50-2191 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0054.g014208 No alias not classified & original description: CDS=1-2511 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0056.g014554 No alias not classified & original description: CDS=1-3528 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0101.g019840 No alias not classified & original description: CDS=144-2663 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0260.g026882 No alias not classified & original description: CDS=1-687 0.02 OrthoFinder output from all 47 species
Sam_g11900 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g12347 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g26236 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g36592 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g12442 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g14596 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g20475 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g23982 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g25377 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g39126 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53358 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55587 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06283 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06522 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g16806 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g16987 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19120 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19923 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g22996 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g23008 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g32370 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g35068 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44229 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e023504_P001 CRR22, Zm00001e023504 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0003724 RNA helicase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004806 triglyceride lipase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006873 cellular monoatomic ion homeostasis IEP HCCA
BP GO:0006874 cellular calcium ion homeostasis IEP HCCA
BP GO:0006875 cellular metal ion homeostasis IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008186 ATP-dependent activity, acting on RNA IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0030003 cellular monoatomic cation homeostasis IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0032469 endoplasmic reticulum calcium ion homeostasis IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048878 chemical homeostasis IEP HCCA
BP GO:0050801 monoatomic ion homeostasis IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0055065 metal ion homeostasis IEP HCCA
BP GO:0055074 calcium ion homeostasis IEP HCCA
BP GO:0055080 monoatomic cation homeostasis IEP HCCA
BP GO:0055082 cellular chemical homeostasis IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0098771 inorganic ion homeostasis IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 608 628
IPR002885 Pentatricopeptide_repeat 436 463
IPR002885 Pentatricopeptide_repeat 336 366
IPR002885 Pentatricopeptide_repeat 308 330
IPR002885 Pentatricopeptide_repeat 135 162
IPR002885 Pentatricopeptide_repeat 532 579
IPR002885 Pentatricopeptide_repeat 634 680
IPR002885 Pentatricopeptide_repeat 233 280
No external refs found!