Dac_g46009 (TADA, ATTADA)

Aliases : TADA, ATTADA

Description : chloroplast-tRNA adenosine deaminase & original description: none

Gene families : OG0001810 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001810_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dac_g46009
Cluster	HCCA: Cluster_121

Target	Alias	Description	ECC score	Gene Family Method
Dde_g07082	TADA, ATTADA	chloroplast-tRNA adenosine deaminase & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g14149	TADA, ATTADA	chloroplast-tRNA adenosine deaminase & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g09771	No alias	EC_3.5 hydrolase acting on carbon-nitrogen bond, other...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0002097	tRNA wobble base modification	None	Extended
BP	GO:0002100	tRNA wobble adenosine to inosine editing	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004000	adenosine deaminase activity	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006382	adenosine to inosine editing	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006400	tRNA modification	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008033	tRNA processing	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008251	tRNA-specific adenosine deaminase activity	IEA	Interproscan
BP	GO:0009451	RNA modification	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016553	base conversion or substitution editing	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	None	Extended
MF	GO:0016814	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines	None	Extended
MF	GO:0019239	deaminase activity	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003697	single-stranded DNA binding	IEP	HCCA
MF	GO:0003743	translation initiation factor activity	IEP	HCCA
BP	GO:0006281	DNA repair	IEP	HCCA
BP	GO:0006413	translational initiation	IEP	HCCA
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	HCCA
BP	GO:0033554	cellular response to stress	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
BP	GO:0051716	cellular response to stimulus	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR028883	tRNA_aden_deaminase	106	281

External Links

No external refs found!

Dac_g46009 (TADA, ATTADA)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation