1. Home
  2. Species
  3. Angiopteris evecta
  4. Sequence
  5. Aev_g04007

Aev_g04007


Description : RING-H2-class BTL-subclass E3 ubiquitin ligase & original description: none


Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g04007

Target Alias Description ECC score Gene Family Method Actions
Ala_g13947 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g03176 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
LOC_Os09g06740.1 LOC_Os09g06740 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g44777 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Pir_g61153 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0035.g011411 No alias not classified & original description: CDS=1-1419 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0040.g012286 No alias not classified & original description: CDS=1-1674 0.02 OrthoFinder output from all 47 species
Sam_g04782 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Solyc02g065650.1.1 Solyc02g065650 E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... 0.03 OrthoFinder output from all 47 species
Solyc08g075910.1.1 RHC1A, Solyc08g075910 Probable E3 ubiquitin-protein ligase RHC1A... 0.02 OrthoFinder output from all 47 species
Zm00001e011788_P002 Zm00001e011788 E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Zm00001e024003_P001 Zm00001e024003 E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... 0.02 OrthoFinder output from all 47 species
Zm00001e027319_P001 Zm00001e027319 E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0061630 ubiquitin protein ligase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 232 274
IPR039525 RNF126-like_zinc-ribbon 8 39
No external refs found!