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  5. Aev_g04174

Aev_g04174 (UPL6)


Aliases : UPL6

Description : E3 ubiquitin ligase *(UPL6) & original description: none


Gene families : OG0001555 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001555_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g04174

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00213880 UPL6,... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AT3G17205 UPL6 ubiquitin protein ligase 6 0.06 OrthoFinder output from all 47 species
AT3G53090 UPL7 ubiquitin-protein ligase 7 0.05 OrthoFinder output from all 47 species
Adi_g001212 UPL7 E3 ubiquitin ligase *(UPL6) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g010409 UPL6 E3 ubiquitin ligase *(UPL6) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g11314 UPL7 E3 ubiquitin ligase *(UPL6) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g14951 UPL6 E3 ubiquitin ligase *(UPL6) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07294 UPL6 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g62754 UPL6 E3 ubiquitin ligase *(UPL6) & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g15928 UPL6 E3 ubiquitin ligase *(UPL6) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g20441 UPL7 E3 ubiquitin ligase *(UPL6) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g10603 UPL6 E3 ubiquitin ligase *(UPL6) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene15620.t1 UPL6, Aspi01Gene15620 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g009688 UPL7 E3 ubiquitin ligase *(UPL6) & original description: CDS=1-3648 0.02 OrthoFinder output from all 47 species
Azfi_s0303.g063774 UPL6 E3 ubiquitin ligase *(UPL6) & original description: CDS=387-992 0.02 OrthoFinder output from all 47 species
Cba_g38315 UPL6 E3 ubiquitin ligase *(UPL6) & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.05G020700.1 UPL6, Ceric.05G020700 E3 ubiquitin ligase *(UPL6) & original description:... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000076.82 UPL7 E3 ubiquitin-protein ligase UPL7 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cre03.g159200 UPL7 Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species
Dcu_g02012 UPL7 E3 ubiquitin ligase *(UPL6) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g10609 UPL6 E3 ubiquitin ligase *(UPL6) & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01033734001 UPL7 Protein degradation.peptide tagging.Ubiquitin... 0.07 OrthoFinder output from all 47 species
GSVIVT01034942001 UPL6 Protein degradation.peptide tagging.Ubiquitin... 0.06 OrthoFinder output from all 47 species
Gb_04194 UPL6 monomeric E3 ubiquitin ligase (HECT) 0.03 OrthoFinder output from all 47 species
Gb_22218 UPL7 monomeric E3 ubiquitin ligase (HECT) 0.07 OrthoFinder output from all 47 species
LOC_Os03g47949.1 UPL7, LOC_Os03g47949 monomeric E3 ubiquitin ligase (HECT) 0.02 OrthoFinder output from all 47 species
LOC_Os05g06690.1 UPL6, LOC_Os05g06690 monomeric E3 ubiquitin ligase (HECT) 0.06 OrthoFinder output from all 47 species
Lfl_g08600 UPL6 E3 ubiquitin ligase *(UPL6) & original description: none 0.04 OrthoFinder output from all 47 species
MA_10260113g0010 UPL7 monomeric E3 ubiquitin ligase (HECT) 0.01 OrthoFinder output from all 47 species
MA_10436808g0010 UPL6 E3 ubiquitin-protein ligase UPL6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp3g18370.1 UPL6 monomeric E3 ubiquitin ligase (HECT) 0.03 OrthoFinder output from all 47 species
Msp_g13572 UPL6 E3 ubiquitin ligase *(UPL6) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g08375 UPL6 E3 ubiquitin ligase *(UPL6) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16308 No alias E3 ubiquitin ligase *(UPL6) & original description: none 0.03 OrthoFinder output from all 47 species
Smo443962 UPL6 Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Solyc01g057900.3.1 UPL6, Solyc01g057900 monomeric E3 ubiquitin ligase (HECT) 0.07 OrthoFinder output from all 47 species
Solyc09g008700.2.1 UPL7, Solyc09g008700 monomeric E3 ubiquitin ligase (HECT) 0.04 OrthoFinder output from all 47 species
Tin_g13531 UPL6 E3 ubiquiTin ligase *(UPL6) & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e012275_P001 UPL7, Zm00001e012275 monomeric E3 ubiquitin ligase (HECT) 0.02 OrthoFinder output from all 47 species
Zm00001e031128_P003 UPL6, Zm00001e031128 monomeric E3 ubiquitin ligase (HECT) 0.05 OrthoFinder output from all 47 species
Zm00001e039899_P001 UPL6, Zm00001e039899 monomeric E3 ubiquitin ligase (HECT) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002098 tRNA wobble uridine modification IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0030259 lipid glycosylation IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0033588 elongator holoenzyme complex IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR000569 HECT_dom 741 1047
No external refs found!