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  5. Aev_g05066

Aev_g05066 (LHCB2.3, LHCB2, LHCB2.4)


Aliases : LHCB2.3, LHCB2, LHCB2.4

Description : component *(LHCb1/2/3) of LHC-II complex & original description: none


Gene families : OG0000137 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000137_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g05066
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00153p00078810 LHCB3*1, LHCB3,... Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder output from all 47 species
AT5G54270 LHCB3*1, LHCB3 light-harvesting chlorophyll B-binding protein 3 0.02 OrthoFinder output from all 47 species
Ala_g06137 LHCB5 component *(LHCb5) of LHC-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04833 LHCB2.3, LHCB2, LHCB2.4 component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 47 species
Aob_g13734 LHCB2.2, LHCB2 component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 47 species
Aob_g17843 LHCB2.2, LHCB2 component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 47 species
Aob_g18768 LHCB3*1, LHCB3 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene25498.t1 LHCB2.3, LHCB2,... component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene31429.t1 LHCB3*1, LHCB3,... component *(LHCb1/2/3) of LHC-II complex & original... 0.04 OrthoFinder output from all 47 species
Cre12.g548400 LHCB2.2, LHCB2 Photosynthesis.photophosphorylation.photosystem... 0.01 OrthoFinder output from all 47 species
Dac_g00552 LHCB5 component *(LHCb5) of LHC-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14033 LHCB3*1, LHCB3 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Dac_g23315 LHCB1.5, LHB1B2 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Dac_g29163 LHCB2.3, LHCB2, LHCB2.4 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Dac_g29164 LHCB2.2, LHCB2 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Dac_g32133 LHCB2.2, LHCB2 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Ehy_g12183 LHCB2.3, LHCB2, LHCB2.4 component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 47 species
LOC_Os03g39610.1 LHCB2.2, LHCB2,... component LHCb1/2/3 of LHC-II complex 0.03 OrthoFinder output from all 47 species
LOC_Os07g37550.1 LHCB3*1, LHCB3,... component LHCb1/2/3 of LHC-II complex 0.02 OrthoFinder output from all 47 species
LOC_Os11g13890.1 LHCB5, LOC_Os11g13890 component LHCb5 of LHC-II complex 0.03 OrthoFinder output from all 47 species
Len_g18196 LHCB5 component *(LHCb5) of LHC-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Len_g33043 LHCB2.2, LHCB2 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
MA_10431300g0020 LHCB2.2, LHCB2 component LHCb1/2/3 of LHC-II complex 0.02 OrthoFinder output from all 47 species
MA_97315g0010 LHCB1.5, LHB1B2 component LHCb1/2/3 of LHC-II complex 0.02 OrthoFinder output from all 47 species
Mp7g05530.1 LHCB2.3, LHCB2, LHCB2.4 component LHCb1/2/3 of LHC-II complex 0.02 OrthoFinder output from all 47 species
Mp7g05980.1 LHCB2.3, LHCB2, LHCB2.4 component LHCb1/2/3 of LHC-II complex 0.02 OrthoFinder output from all 47 species
Nbi_g30527 LHCB1.5, LHB1B2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g39616 LHCB2.2, LHCB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g21027 LHCB2.2, LHCB2 component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 47 species
Ore_g32299 LHCB2.3, LHCB2, LHCB2.4 component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 47 species
Ore_g41462 LHCB3*1, LHCB3 component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 47 species
Pir_g47176 LHCB1.5, LHB1B2 component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 47 species
Pp3c5_7150V3.1 LHCB2.3, LHCB2,... photosystem II light harvesting complex gene 2.1 0.01 OrthoFinder output from all 47 species
Smo407444 LHCB3*1, LHCB3 Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder output from all 47 species
Smo444370 LHCB5 Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder output from all 47 species
Smo75552 LHCB2.3, LHCB2, LHCB2.4 Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder output from all 47 species
Spa_g13888 LHCB1.5, LHB1B2 component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 47 species
Spa_g29645 LHCB3*1, LHCB3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g15266 LHCB2.3, LHCB2, LHCB2.4 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Zm00001e011045_P002 LHCB5, Zm00001e011045 component LHCb5 of LHC-II complex 0.02 OrthoFinder output from all 47 species
Zm00001e021290_P001 LHCB5, Zm00001e021290 component LHCb5 of LHC-II complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0050525 cutinase activity IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 28 194
No external refs found!