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  5. AMTR_s00001p00032080

AMTR_s00001p00032080 (CYCB2;3,...)


Aliases : CYCB2;3, evm_27.TU.AmTr_v1.0_scaffold00001.15

Description : Cell cycle.regulation.cyclins.CYCB-type cyclin


Gene families : OG0000745 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000745_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00032080
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AT1G16330 CYCB3;1 cyclin b3;1 0.05 OrthoFinder output from all 47 species
AT1G20610 CYCB2;3 Cyclin B2;3 0.11 OrthoFinder output from all 47 species
AT1G76310 CYCB2;4 CYCLIN B2;4 0.19 OrthoFinder output from all 47 species
AT2G17620 CYCB2;1 Cyclin B2;1 0.12 OrthoFinder output from all 47 species
AT2G26760 CYCB1;4 Cyclin B1;4 0.15 OrthoFinder output from all 47 species
AT3G11520 CYCB1;3, CYC2 CYCLIN B1;3 0.16 OrthoFinder output from all 47 species
AT4G35620 CYCB2;2 Cyclin B2;2 0.17 OrthoFinder output from all 47 species
AT5G06150 CYCB1;2, CYC1BAT Cyclin family protein 0.04 OrthoFinder output from all 47 species
Adi_g082397 CYCB2;2 regulatory protein *(CYCB) of cell cycle & original... 0.09 OrthoFinder output from all 47 species
Aev_g38549 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Aev_g40209 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Ala_g23920 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.11 OrthoFinder output from all 47 species
Als_g12448 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.07 OrthoFinder output from all 47 species
Als_g15872 CYCB1;2, CYC1BAT not classified & original description: none 0.11 OrthoFinder output from all 47 species
Als_g16595 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.11 OrthoFinder output from all 47 species
Als_g29465 CYCB1;2, CYC1BAT regulatory protein *(CYCB) of cell cycle & original... 0.1 OrthoFinder output from all 47 species
Als_g52020 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.06 OrthoFinder output from all 47 species
Als_g58773 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.11 OrthoFinder output from all 47 species
Aop_g07135 CYCB2;4 regulatory protein *(CYCB) of cell cycle & original... 0.17 OrthoFinder output from all 47 species
Aop_g18716 CYCB2;2 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g43830 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Aop_g70320 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene11290.t2 CYCB2;3, Aspi01Gene11290 regulatory protein *(CYCB) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene30752.t1 CYCB2;3, Aspi01Gene30752 regulatory protein *(CYCB) of cell cycle & original... 0.1 OrthoFinder output from all 47 species
Aspi01Gene31815.t1 CYCB2;3, Aspi01Gene31815 regulatory protein *(CYCB) of cell cycle & original... 0.11 OrthoFinder output from all 47 species
Aspi01Gene49219.t1 CYCB2;3, Aspi01Gene49219 regulatory protein *(CYCB) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene63213.t2 CYCB2;3, Aspi01Gene63213 regulatory protein *(CYCB) of cell cycle & original... 0.09 OrthoFinder output from all 47 species
Azfi_s0065.g035814 CYCB2;3 component *(MED19) of head module of MEDIATOR... 0.07 OrthoFinder output from all 47 species
Azfi_s0113.g045905 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.08 OrthoFinder output from all 47 species
Azfi_s0230.g059168 CYCB2;4 not classified & original description: CDS=1-1479 0.06 OrthoFinder output from all 47 species
Azfi_s0872.g090692 CYCB2;4 not classified & original description: CDS=157-1278 0.06 OrthoFinder output from all 47 species
Ceric.06G046300.1 CYCB2;3, Ceric.06G046300 regulatory protein *(CYCB) of cell cycle & original... 0.17 OrthoFinder output from all 47 species
Ceric.18G071600.1 CYCB2;3, Ceric.18G071600 regulatory protein *(CYCB) of cell cycle & original... 0.21 OrthoFinder output from all 47 species
Ceric.21G047800.1 CYCB2;3, Ceric.21G047800 regulatory protein *(CYCB) of cell cycle & original... 0.2 OrthoFinder output from all 47 species
Ceric.24G055000.1 CYCB2;3, Ceric.24G055000 regulatory protein *(CYCB) of cell cycle & original... 0.18 OrthoFinder output from all 47 species
Ceric.26G002300.1 CYCB2;3, Ceric.26G002300 regulatory protein *(CYCB) of cell cycle & original... 0.17 OrthoFinder output from all 47 species
Ceric.31G034200.1 CYCB2;3, Ceric.31G034200 regulatory protein *(CYCB) of cell cycle & original... 0.21 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000769.38 CYCB2;1 Cell cycle.regulation.cyclins.CYCB-type cyclin 0.07 OrthoFinder output from all 47 species
Cre08.g370401 CYCB2;2 Cyclin-B2-2 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Dac_g13470 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.07 OrthoFinder output from all 47 species
Dac_g17049 CYCB2;4 regulatory protein *(CYCB) of cell cycle & original... 0.09 OrthoFinder output from all 47 species
Dac_g39037 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Dcu_g01163 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.15 OrthoFinder output from all 47 species
Dcu_g03733 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.14 OrthoFinder output from all 47 species
Dcu_g08761 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.12 OrthoFinder output from all 47 species
GSVIVT01009895001 CYCB2;3 Cell cycle.regulation.cyclins.CYCB-type cyclin 0.28 OrthoFinder output from all 47 species
GSVIVT01025781001 CYCB1;2, CYC1BAT Cell cycle.regulation.cyclins.CYCB-type cyclin 0.3 OrthoFinder output from all 47 species
GSVIVT01032782001 CYCB1;2, CYC1BAT Cell cycle.regulation.cyclins.CYCB-type cyclin 0.28 OrthoFinder output from all 47 species
GSVIVT01036739001 CYCB3;1 Cell cycle.regulation.cyclins.CYCB-type cyclin 0.23 OrthoFinder output from all 47 species
Gb_01761 CYCB3;1 cyclin (CYCB) 0.11 OrthoFinder output from all 47 species
Gb_03506 CYCB1;4 cyclin (CYCB) 0.16 OrthoFinder output from all 47 species
Gb_10664 CYCB2;3 cyclin (CYCB) 0.17 OrthoFinder output from all 47 species
Gb_27795 CYCB1;2, CYC1BAT G2/mitotic-specific cyclin-1 OS=Antirrhinum majus... 0.18 OrthoFinder output from all 47 species
LOC_Os01g59120.1 CYCB1;2,... cyclin (CYCB) 0.23 OrthoFinder output from all 47 species
LOC_Os04g47580.1 CYCB2;3, LOC_Os04g47580 cyclin (CYCB) 0.26 OrthoFinder output from all 47 species
LOC_Os05g41390.1 CYCB1;2,... cyclin (CYCB) 0.18 OrthoFinder output from all 47 species
LOC_Os06g51110.2 CYCB2;3, LOC_Os06g51110 cyclin (CYCB) 0.24 OrthoFinder output from all 47 species
Len_g03835 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Len_g05365 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.1 OrthoFinder output from all 47 species
Len_g11919 CYCB2;4 regulatory protein *(CYCB) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Len_g56071 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.1 OrthoFinder output from all 47 species
Lfl_g25214 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Lfl_g25818 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.09 OrthoFinder output from all 47 species
MA_10428837g0030 CYCB1;3, CYC2 cyclin (CYCB) 0.16 OrthoFinder output from all 47 species
MA_10433093g0020 CYCB2;3 Cyclin-B2-1 OS=Oryza sativa subsp. indica... 0.19 OrthoFinder output from all 47 species
MA_127335g0010 CYCB2;3 cyclin (CYCB) 0.09 OrthoFinder output from all 47 species
MA_311439g0010 CYCB1;3, CYC2 cyclin (CYCB) 0.09 OrthoFinder output from all 47 species
MA_855375g0010 CYCB2;3 Cyclin-B2-1 OS=Oryza sativa subsp. indica... 0.15 OrthoFinder output from all 47 species
Mp2g00590.1 CYCB2;3 cyclin (CYCB) 0.08 OrthoFinder output from all 47 species
Mp5g10030.1 CYCB2;2 cyclin (CYCB) 0.15 OrthoFinder output from all 47 species
Msp_g05360 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.1 OrthoFinder output from all 47 species
Msp_g07854 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.16 OrthoFinder output from all 47 species
Msp_g21114 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.16 OrthoFinder output from all 47 species
Msp_g42899 CYCB2;4 regulatory protein *(CYCB) of cell cycle & original... 0.19 OrthoFinder output from all 47 species
Nbi_g03000 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.2 OrthoFinder output from all 47 species
Nbi_g04270 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.09 OrthoFinder output from all 47 species
Nbi_g39363 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.12 OrthoFinder output from all 47 species
Ore_g41900 CYCB2;2 regulatory protein *(CYCB) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Ore_g42925 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Pir_g18672 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Ppi_g02940 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Ppi_g12194 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.1 OrthoFinder output from all 47 species
Sacu_v1.1_s0031.g010562 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0200.g025590 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0210.g025884 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.09 OrthoFinder output from all 47 species
Sam_g16342 No alias regulatory protein *(CYCB) of cell cycle & original... 0.11 OrthoFinder output from all 47 species
Sam_g24353 No alias regulatory protein *(CYCB) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Smo230742 CYCB1;2, CYC1BAT Cell cycle.regulation.cyclins.CYCB-type cyclin 0.1 OrthoFinder output from all 47 species
Solyc01g009040.4.1 CYCB1;2,... cyclin (CYCB) 0.13 OrthoFinder output from all 47 species
Solyc02g082820.3.1 CYCB2;3, Solyc02g082820 cyclin (CYCB) 0.09 OrthoFinder output from all 47 species
Solyc03g032190.3.1 CYCB2;3, Solyc03g032190 cyclin (CYCB) 0.16 OrthoFinder output from all 47 species
Solyc04g081660.3.1 CYCB2;4, Solyc04g081660 Cyclin-B2-4 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc04g082430.3.1 CYCB2;4, Solyc04g082430 cyclin (CYCB) 0.05 OrthoFinder output from all 47 species
Solyc06g073610.3.1 CYCB1;2,... cyclin (CYCB) 0.03 OrthoFinder output from all 47 species
Solyc07g066660.4.1 CYCB3;1, Solyc07g066660 cyclin (CYCB) 0.08 OrthoFinder output from all 47 species
Spa_g04211 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.09 OrthoFinder output from all 47 species
Spa_g08492 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Spa_g23146 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.12 OrthoFinder output from all 47 species
Spa_g43416 CYCA3;1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g50231 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.08 OrthoFinder output from all 47 species
Spa_g52264 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.15 OrthoFinder output from all 47 species
Spa_g53648 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.06 OrthoFinder output from all 47 species
Tin_g05068 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.07 OrthoFinder output from all 47 species
Tin_g12417 CYCB2;4 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g39135 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Zm00001e007244_P001 CYCB2;3, Zm00001e007244 cyclin (CYCB) 0.13 OrthoFinder output from all 47 species
Zm00001e019528_P002 CYCB1;2,... cyclin (CYCB) 0.1 OrthoFinder output from all 47 species
Zm00001e025467_P001 CYCB1;2,... Cyclin-B1-3 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Zm00001e027336_P001 CYCB1;2,... cyclin (CYCB) 0.09 OrthoFinder output from all 47 species
Zm00001e028899_P002 CYCB1;2,... cyclin (CYCB) 0.17 OrthoFinder output from all 47 species
Zm00001e030146_P001 CYCB2;3, Zm00001e030146 cyclin (CYCB) 0.07 OrthoFinder output from all 47 species
Zm00001e041485_P001 CYCB2;3, Zm00001e041485 cyclin (CYCB) 0.12 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0000910 cytokinesis IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006184 obsolete GTP catabolic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051258 protein polymerization IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR004367 Cyclin_C-dom 312 427
IPR006671 Cyclin_N 184 309
No external refs found!