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  5. AMTR_s00001p00121850

AMTR_s00001p00121850 (RHS8,...)


Aliases : RHS8, evm_27.TU.AmTr_v1.0_scaffold00001.91

Description : Cell wall.hemicellulose.xyloglucan.synthesis.xyloglucan galacturonosyltransferase


Gene families : OG0000180 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000180_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00121850
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AT1G68470 No alias Exostosin family protein 0.02 OrthoFinder output from all 47 species
Aob_g32287 MUR3, KAM1 1,2-beta-galactosyltransferase *(MUR3-like) & original... 0.02 OrthoFinder output from all 47 species
Aop_g10051 ATGT13, GT13 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g68660 MUR3, KAM1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g03928 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g25028 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g43194 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05961 RHS8 galacturonosyltransferase *(XUT1) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09772 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_17818 No alias Probable xyloglucan galactosyltransferase GT11... 0.02 OrthoFinder output from all 47 species
Len_g15220 GT18, ATGT18 galactosyltransferase *(XLT2) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10428118g0010 No alias Probable xyloglucan galactosyltransferase GT19... 0.01 OrthoFinder output from all 47 species
MA_28102g0010 RHS8 Xyloglucan-specific galacturonosyltransferase 1... 0.01 OrthoFinder output from all 47 species
MA_6286334g0010 No alias Probable xyloglucan galactosyltransferase GT19... 0.01 OrthoFinder output from all 47 species
Msp_g37133 GT18, ATGT18 galactosyltransferase *(XLT2) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17854 ATGT13, GT13 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26274 RHS8 galacturonosyltransferase *(XUT1) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g36894 MUR3, KAM1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g16296 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g16802 GT18, ATGT18 galactosyltransferase *(XLT2) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g28905 GT18, ATGT18 galactosyltransferase *(XLT2) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR004263 Exostosin 264 599
No external refs found!