Aliases : CRR2, evm_27.TU.AmTr_v1.0_scaffold00001.140
Description : Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidopsis thaliana
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00001p00155170 | |
| Cluster | HCCA: Cluster_1 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g012988 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g034915 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g058239 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g066461 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g085223 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g109885 | DOT4 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g110647 | MEF21 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g115360 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g49640 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g04237 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g05108 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g13495 | MEF22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g17647 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g22711 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g24621 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g24743 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g31162 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g31182 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g32891 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g34224 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g35633 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g36546 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g38429 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g26680 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g30598 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g54766 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g63751 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g09057 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g09079 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g09923 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g15602 | EMB2261 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g18705 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g27890 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g27904 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g28235 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g30166 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g34282 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g36878 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g42153 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g02808 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g05575 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g11007 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g16850 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g28296 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene29888.t1 | Aspi01Gene29888 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene67429.t2 | Aspi01Gene67429 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0216.g058493 | No alias | not classified & original description: CDS=1-2574 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s1707.g105997 | No alias | not classified & original description: CDS=1-2574 | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g22397 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.02G028200.1 | OTP84, Ceric.02G028200 | not classified & original description: pacid=50583866... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.02G047700.1 | Ceric.02G047700 | not classified & original description: pacid=50586056... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.15G066400.1 | Ceric.15G066400 | not classified & original description: pacid=50640755... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.17G033700.1 | VAC1, ECB2,... | not classified & original description: pacid=50617387... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.18G077100.1 | Ceric.18G077100 | not classified & original description: pacid=50621411... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.19G000700.1 | VAC1, ECB2,... | not classified & original description: pacid=50576122... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.23G075200.1 | Ceric.23G075200 | not classified & original description: pacid=50610693... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g04912 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g35267 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g46003 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g04207 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g08906 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g43282 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g49213 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g19602 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g23570 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g46821 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g50444 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Gb_08569 | OTP84 | RNA editing factor (OTP82) | 0.02 | OrthoFinder output from all 47 species | |
| Gb_40680 | CRR22 | Pentatricopeptide repeat-containing protein At2g22070... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g41650.1 | LOC_Os01g41650 | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g17743 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g38488 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g04862 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g05734 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g06094 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g06226 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g12347 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g15182 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g28057 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g39660 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_10164206g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_17949g0010 | CRR22 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_18165g0010 | CRR22 | Pentatricopeptide repeat-containing protein At3g12770... | 0.02 | OrthoFinder output from all 47 species | |
| MA_31170g0010 | CRR22 | RNA editing factor (MEF19) | 0.03 | OrthoFinder output from all 47 species | |
| MA_34492g0010 | No alias | Pentatricopeptide repeat-containing protein At3g57430,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_77675g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | OrthoFinder output from all 47 species | |
| MA_8319g0010 | CRR2 | Pentatricopeptide repeat-containing protein At3g24000,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_94165g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g03892 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g17701 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g20155 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g25560 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g29103 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g42976 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g03200 | REME1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g16061 | OSB3 | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g25357 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g13480 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g07356 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g53382 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g57919 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g61249 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0040.g012420 | No alias | not classified & original description: CDS=519-2384 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g16013 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g08793 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g27577 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g55548 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g04160 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g06092 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g19926 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g20335 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000151 | ubiquitin ligase complex | IEP | HCCA |
| MF | GO:0004672 | protein kinase activity | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
| BP | GO:0016310 | phosphorylation | IEP | HCCA |
| BP | GO:0016567 | protein ubiquitination | IEP | HCCA |
| MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
| MF | GO:0051539 | 4 iron, 4 sulfur cluster binding | IEP | HCCA |
| MF | GO:0051540 | metal cluster binding | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
| CC | GO:1990234 | transferase complex | IEP | HCCA |
| No external refs found! |
