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  5. AMTR_s00001p00240800

AMTR_s00001p00240800 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00001.277

Description : Basic endochitinase A OS=Secale cereale


Gene families : OG0000280 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000280_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00240800

Target Alias Description ECC score Gene Family Method Actions
AT2G43620 No alias Chitinase family protein 0.03 OrthoFinder output from all 47 species
Aev_g37268 HCHIB, B-CHI,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g36519 HCHIB, B-CHI,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g07377 HCHIB, B-CHI,... basic chitinase *(CHIB) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_29992 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os10g39680.1 HCHIB, B-CHI,... Chitinase 8 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Lfl_g15813 ATEP3, EP3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10427514g0010 No alias Chitinase 4 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Smo14768 HCHIB, B-CHI,... Chitinase 2 OS=Oryza sativa subsp. japonica 0.04 OrthoFinder output from all 47 species
Smo419028 No alias No description available 0.05 OrthoFinder output from all 47 species
Smo426710 No alias Endochitinase A OS=Zea mays 0.03 OrthoFinder output from all 47 species
Solyc10g074440.2.1 HCHIB, B-CHI,... Endochitinase OS=Solanum tuberosum (sp|p05315|chit_soltu : 491.0) 0.04 OrthoFinder output from all 47 species
Zm00001e013318_P001 HCHIB, B-CHI,... Chitinase 9 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEA Interproscan
BP GO:0006032 chitin catabolic process IEA Interproscan
BP GO:0016998 cell wall macromolecule catabolic process IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000726 Glyco_hydro_19_cat 1 77
No external refs found!