Aev_g05257 (PUB8, B80)

Aliases : PUB8, B80

Description : E3 ubiquitin ligase *(PUB8) & original description: none

Gene families : OG0000092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aev_g05257

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00072p00171260	PUB14, ATPUB14,...	Protein degradation.peptide tagging.Ubiquitin...	0.02	OrthoFinder output from all 47 species
AT1G29340	ATPUB17, PUB17	plant U-box 17	0.03	OrthoFinder output from all 47 species
AT2G28830	PUB12, AtPUB12	PLANT U-BOX 12	0.03	OrthoFinder output from all 47 species
Adi_g009234	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g013470	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g17546	PUB13, ATPUB13	E3 ubiquitin ligase & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g17547	PUB13, ATPUB13	E3 ubiquitin ligase & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0068.g036326	No alias	not classified & original description: CDS=1-918	0.03	OrthoFinder output from all 47 species
Ceric.35G012000.1	PUB13, ATPUB13,...	E3 ubiquitin ligase & original description:...	0.02	OrthoFinder output from all 47 species
Dac_g12068	No alias	E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g29208	PUB13, ATPUB13	E3 ubiquitin ligase & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01016225001	PUB14, ATPUB14	U-box domain-containing protein 14 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
GSVIVT01020229001	No alias	Protein degradation.peptide tagging.Ubiquitin...	0.04	OrthoFinder output from all 47 species
GSVIVT01021265001	ATPUB17, PUB17	U-box domain-containing protein 17 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
MA_161374g0020	PUB18, ATPUB18	U-box domain-containing protein 1 OS=Medicago truncatula...	0.03	OrthoFinder output from all 47 species
MA_375372g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Nbi_g03090	PUB13, ATPUB13	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g11295	PUB13, ATPUB13	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g19747	No alias	E3 ubiquitin ligase & original description: none	0.02	OrthoFinder output from all 47 species
Solyc02g072080.1.1	ATPUB17, PUB17,...	U-box domain-containing protein 17 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Solyc09g056450.4.1	PUB9, ATPUB9,...	U-box domain-containing protein 9 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Tin_g01104	No alias	E3 ubiquiTin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g30902	PUB13, ATPUB13	E3 ubiquiTin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e014566_P002	PUB9, ATPUB9,...	E3 ubiquitin ligase (PUB)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004180	carboxypeptidase activity	IEP	HCCA
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	HCCA
BP	GO:0006508	proteolysis	IEP	HCCA
MF	GO:0008233	peptidase activity	IEP	HCCA
MF	GO:0008236	serine-type peptidase activity	IEP	HCCA
MF	GO:0008238	exopeptidase activity	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0017171	serine hydrolase activity	IEP	HCCA
MF	GO:0070008	serine-type exopeptidase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	5	72

External Links

No external refs found!

Aev_g05257 (PUB8, B80)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation