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  5. AMTR_s00001p00251380

AMTR_s00001p00251380 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00001.319

Description : Protein BPS1, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0000221 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000221_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00251380
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
AT1G01550 BPS1 Protein of unknown function (DUF793) 0.06 OrthoFinder output from all 47 species
AT1G18740 No alias Protein of unknown function (DUF793) 0.11 OrthoFinder output from all 47 species
AT1G74450 No alias Protein of unknown function (DUF793) 0.08 OrthoFinder output from all 47 species
Adi_g009056 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g009779 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g024256 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g024370 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g051939 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g074108 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g084369 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g109052 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g03912 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g06585 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g33204 BPS1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g01817 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g10598 BPS1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24209 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g01778 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g04972 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g07595 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g35619 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g51907 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54448 BPS1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01622 BPS1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07741 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g17662 BPS1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29556 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene17514.t1 Aspi01Gene17514 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene58350.t1 Aspi01Gene58350 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene64303.t1 Aspi01Gene64303 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68451.t1 Aspi01Gene68451 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g02551 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G113400.1 Ceric.02G113400 not classified & original description: pacid=50585249... 0.03 OrthoFinder output from all 47 species
Ceric.04G039400.1 Ceric.04G039400 not classified & original description: pacid=50630851... 0.06 OrthoFinder output from all 47 species
Ceric.1Z027800.1 Ceric.1Z027800 not classified & original description: pacid=50597254... 0.03 OrthoFinder output from all 47 species
Ceric.22G029500.1 Ceric.22G029500 not classified & original description: pacid=50614434... 0.02 OrthoFinder output from all 47 species
Ceric.22G031900.1 BPS1, Ceric.22G031900 not classified & original description: pacid=50615144... 0.02 OrthoFinder output from all 47 species
Ceric.22G032000.1 Ceric.22G032000 not classified & original description: pacid=50615093... 0.02 OrthoFinder output from all 47 species
Ceric.22G032100.1 Ceric.22G032100 not classified & original description: pacid=50614987... 0.02 OrthoFinder output from all 47 species
Ceric.22G032200.1 BPS1, Ceric.22G032200 not classified & original description: pacid=50614808... 0.02 OrthoFinder output from all 47 species
Ceric.22G032300.1 Ceric.22G032300 not classified & original description: pacid=50615347... 0.02 OrthoFinder output from all 47 species
Ceric.25G006500.1 Ceric.25G006500 not classified & original description: pacid=50594057... 0.07 OrthoFinder output from all 47 species
Ceric.27G016500.1 Ceric.27G016500 not classified & original description: pacid=50605586... 0.03 OrthoFinder output from all 47 species
Ceric.28G046900.1 Ceric.28G046900 not classified & original description: pacid=50570300... 0.02 OrthoFinder output from all 47 species
Ceric.28G062100.1 Ceric.28G062100 not classified & original description: pacid=50570697... 0.02 OrthoFinder output from all 47 species
Dac_g13361 BPS1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g34503 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g42208 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15225 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17649 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g19319 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g23107 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019411001 ROH1 No description available 0.07 OrthoFinder output from all 47 species
Gb_06674 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Gb_18309 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_18312 No alias Protein BPS1, chloroplastic OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_22841 No alias Protein BPS1, chloroplastic OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species
Gb_22842 No alias Protein BPS1, chloroplastic OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Gb_24960 No alias Protein BPS1, chloroplastic OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
LOC_Os02g01930.1 ROH1, LOC_Os02g01930 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os11g06440.1 LOC_Os11g06440 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os12g06780.1 LOC_Os12g06780 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g11084 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g16261 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04721 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05382 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06125 BPS1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g25221 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g38463 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10430484g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_11152g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_123240g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_130577g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_16561g0010 No alias Protein BPS1, chloroplastic OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_85744g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g08592 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g11031 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Msp_g18667 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g35676 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g48226 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g48320 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g01034 BPS1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g01945 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g31415 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g09883 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18825 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30449 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g31096 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09452 BPS1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12102 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g21991 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g50256 ROH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g31153 BPS1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04451 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0050.g013818 No alias not classified & original description: CDS=1-1071 0.04 OrthoFinder output from all 47 species
Sam_g10143 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo422297 No alias No description available 0.02 OrthoFinder output from all 47 species
Smo440489 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc01g094950.3.1 Solyc01g094950 Protein BPS1, chloroplastic OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc04g071480.1.1 Solyc04g071480 no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
Solyc12g056550.1.1 Solyc12g056550 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g07215 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g09588 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g18331 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g25384 BPS1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g38799 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53529 BPS1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g03876 BPS1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e009073_P001 Zm00001e009073 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e018455_P001 Zm00001e018455 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e024656_P001 Zm00001e024656 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR008511 ROH1-like 177 339
No external refs found!