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  5. AMTR_s00001p00251650

AMTR_s00001p00251650 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00001.320

Description : UPF0496 protein 4 OS=Oryza sativa subsp. japonica


Gene families : OG0000221 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000221_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00251650

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene41887.t1 Aspi01Gene41887 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g11598 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g10143 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004372 glycine hydroxymethyltransferase activity IEP HCCA
BP GO:0006544 glycine metabolic process IEP HCCA
BP GO:0006563 L-serine metabolic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR008511 ROH1-like 36 136
IPR008511 ROH1-like 199 341
No external refs found!