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  5. AMTR_s00001p00254670

AMTR_s00001p00254670 (ATFRO2, FRO2, FRD1,...)


Aliases : ATFRO2, FRO2, FRD1, evm_27.TU.AmTr_v1.0_scaffold00001.333

Description : Nutrient uptake.copper uptake.reduction-based uptake.FRO metal ion-chelate reductase


Gene families : OG0000835 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000835_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00254670
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
AT1G01590 ATFRO1, FRO1 ferric reduction oxidase 1 0.01 OrthoFinder output from all 47 species
AT5G50160 FRO8, ATFRO8 ferric reduction oxidase 8 0.02 OrthoFinder output from all 47 species
Ala_g04681 ATFRO6, FRO6 metal ion-chelate reductase *(FRO) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene57953.t1 ATFRO6, FRO6,... metal ion-chelate reductase *(FRO) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0011.g012516 ATFRO6, FRO6 metal ion-chelate reductase *(FRO) & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0048.g030635 ATFRO6, FRO6 metal ion-chelate reductase *(FRO) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0068.g036460 ATFRO6, FRO6 metal ion-chelate reductase *(FRO) & original... 0.03 OrthoFinder output from all 47 species
Cba_g32425 FRO7, ATFRO7 metal ion-chelate reductase *(FRO) & original description: none 0.02 OrthoFinder output from all 47 species
Gb_17654 ATFRO1, FRO1 iron uptake Fe(III)-chelate reductase. metal ion-chelate... 0.04 OrthoFinder output from all 47 species
Msp_g33345 ATFRO6, FRO6 metal ion-chelate reductase *(FRO) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59182 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26394 No alias metal ion-chelate reductase *(FRO) & original description: none 0.02 OrthoFinder output from all 47 species
Smo110167 FRO4, ATFRO4 Nutrient uptake.copper uptake.reduction-based uptake.FRO... 0.03 OrthoFinder output from all 47 species
Smo416972 ATFRO2, FRO2, FRD1 Ferric reduction oxidase 2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Smo440376 ATFRO2, FRO2, FRD1 Nutrient uptake.copper uptake.reduction-based uptake.FRO... 0.03 OrthoFinder output from all 47 species
Solyc01g094910.3.1 ATFRO2, FRO2,... iron uptake Fe(III)-chelate reductase. metal ion-chelate... 0.04 OrthoFinder output from all 47 species
Solyc03g008015.1.1 FRO4, ATFRO4,... iron uptake Fe(III)-chelate reductase. metal ion-chelate... 0.03 OrthoFinder output from all 47 species
Tin_g21958 ATFRO6, FRO6 metal ion-chelate reductase *(FRO) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
CC GO:0048046 apoplast IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR013112 FAD-bd_8 236 334
IPR013121 Fe_red_NAD-bd_6 340 609
IPR013130 Fe3_Rdtase_TM_dom 82 201
No external refs found!