AMTR_s00001p00261720 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00001.382

Description : RNA biosynthesis.transcriptional activation.bZIP superfamily.bZIP transcription factor

Gene families : OG0000155 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000155_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00001p00261720

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00030p00186860	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.bZIP...	0.05	OrthoFinder output from all 47 species
Als_g16415	No alias	bZIP class-I transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g22106	ATBZIP61, BZIP61	bZIP class-L transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g16590	No alias	bZIP class-L transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene07122.t1	Aspi01Gene07122	bZIP class-I transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene31324.t1	Aspi01Gene31324	bZIP class-I transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene47006.t1	Aspi01Gene47006	bZIP class-I transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene56304.t1	Aspi01Gene56304	bZIP class-I transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0140.g051238	AtbZIP52, bZIP52	bZIP class-I transcription factor & original...	0.05	OrthoFinder output from all 47 species
Ceric.09G004400.1	Ceric.09G004400	bZIP class-L transcription factor & original...	0.04	OrthoFinder output from all 47 species
Dcu_g01833	No alias	bZIP class-I transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g11306	No alias	bZIP class-I transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Len_g08821	No alias	bZIP class-L transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Len_g15516	No alias	bZIP class-I transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g10353	No alias	bZIP class-I transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Msp_g09064	No alias	bZIP class-I transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0088.g018533	No alias	bZIP class-I transcription factor & original...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0110.g020632	ATBZIP34, BZIP34	bZIP class-L transcription factor & original...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s1006.g027904	No alias	bZIP class-I transcription factor & original...	0.02	OrthoFinder output from all 47 species
Sam_g24727	No alias	bZIP class-I transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Smo77868	No alias	RNA biosynthesis.transcriptional activation.bZIP...	0.02	OrthoFinder output from all 47 species
Solyc01g103875.1.1	Solyc01g103875	transcription factor (bZIP)	0.03	OrthoFinder output from all 47 species
Spa_g09387	ATBZIP61, BZIP61	bZIP class-L transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g11893	ATBZIP61, BZIP61	bZIP class-L transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e014321_P001	ATBZIP61,...	transcription factor (bZIP)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006259	DNA metabolic process	IEP	HCCA
BP	GO:0006281	DNA repair	IEP	HCCA
BP	GO:0006284	base-excision repair	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0006400	tRNA modification	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	HCCA
BP	GO:0008033	tRNA processing	IEP	HCCA
BP	GO:0008037	cell recognition	IEP	HCCA
MF	GO:0008173	RNA methyltransferase activity	IEP	HCCA
MF	GO:0008175	tRNA methyltransferase activity	IEP	HCCA
MF	GO:0008176	tRNA (guanine-N7-)-methyltransferase activity	IEP	HCCA
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	HCCA
BP	GO:0009451	RNA modification	IEP	HCCA
MF	GO:0016423	tRNA (guanine) methyltransferase activity	IEP	HCCA
BP	GO:0033554	cellular response to stress	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
BP	GO:0048544	recognition of pollen	IEP	HCCA
BP	GO:0051716	cellular response to stimulus	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004827	bZIP	274	313

External Links

No external refs found!

AMTR_s00001p00261720 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation