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  5. AMTR_s00001p00269070

AMTR_s00001p00269070 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00001.430

No description available


Gene families : OG0002401 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002401_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00269070
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00269160 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.04 OrthoFinder output from all 47 species
AMTR_s00002p00041060 evm_27.TU.AmTr_v1... Nutrient uptake.copper uptake.regulation.bHLH-Ib... 0.02 OrthoFinder output from all 47 species
AMTR_s00063p00154030 ORG2, BHLH038,... Nutrient uptake.copper uptake.regulation.bHLH-Ib... 0.02 OrthoFinder output from all 47 species
AT4G25400 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
GSVIVT01033618001 ORG2, BHLH038 Nutrient uptake.copper uptake.regulation.bHLH-Ib... 0.05 OrthoFinder output from all 47 species
Gb_26737 No alias transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Gb_26741 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g01870.1 LOC_Os01g01870 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_331265g0010 No alias transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_68586g0010 BHLH101 transcription factor (bHLH). iron/copper homeostasis... 0.03 OrthoFinder output from all 47 species
MA_8008760g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc02g078130.3.1 Solyc02g078130 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Solyc03g006910.3.1 Solyc03g006910 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Solyc09g074805.1.1 Solyc09g074805 transcription factor (bHLH) 0.06 OrthoFinder output from all 47 species
Solyc10g079650.2.1 BHLH100, Solyc10g079650 transcription factor (bHLH). iron/copper homeostasis... 0.03 OrthoFinder output from all 47 species
Solyc10g079660.3.1 ORG2, BHLH038,... transcription factor (bHLH). iron/copper homeostasis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!