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  5. Aev_g05269

Aev_g05269


Description : not classified & original description: none


Gene families : OG0001109 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001109_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g05269
Cluster HCCA: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00234p00014000 evm_27.TU.AmTr_v1... Calcium-binding protein KIC OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00234p00015090 evm_27.TU.AmTr_v1... Calcium-binding protein KIC OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT2G46600 No alias Calcium-binding EF-hand family protein 0.03 OrthoFinder output from all 47 species
AT4G27280 No alias Calcium-binding EF-hand family protein 0.05 OrthoFinder output from all 47 species
AT5G54490 PBP1 pinoid-binding protein 1 0.05 OrthoFinder output from all 47 species
Als_g42174 PBP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g59479 PBP1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g02623 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g22275 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene16361.t1 PBP1, Aspi01Gene16361 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene63044.t1 PBP1, Aspi01Gene63044 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.24G000200.1 Ceric.24G000200 not classified & original description: pacid=50629224... 0.03 OrthoFinder output from all 47 species
Ceric.24G000300.1 Ceric.24G000300 not classified & original description: pacid=50628799... 0.03 OrthoFinder output from all 47 species
Dac_g19238 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g00624 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01013226001 PBP1 Calcium-binding protein PBP1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01014539001 PBP1 Calcium-binding protein KRP1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_30620 No alias Calcium-binding protein KIC OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os02g03020.1 LOC_Os02g03020 Calcium-binding protein KIC OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os06g46950.1 LOC_Os06g46950 Calcium-binding protein KIC OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10168324g0010 No alias Calcium-binding protein KIC OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Msp_g09603 PBP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09084 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g26313 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g28291 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0110.g020622 No alias not classified & original description: CDS=1-366 0.03 OrthoFinder output from all 47 species
Solyc02g079720.1.1 PBP1, Solyc02g079720 Calcium-binding protein KRP1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc07g053050.1.1 Solyc07g053050 Calcium-binding protein KRP1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc10g006660.3.1 Solyc10g006660 Calcium-binding protein KRP1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc10g006700.1.1 Solyc10g006700 Calcium-binding protein KRP1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g56724 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g57374 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e013045_P001 Zm00001e013045 Calcium-binding protein KIC OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e019618_P001 PBP1, Zm00001e019618 Calcium-binding protein PBP1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 32 83
No external refs found!