AMTR_s00001p00271900 (LWD1, ATAN11,...)


Aliases : LWD1, ATAN11, evm_27.TU.AmTr_v1.0_scaffold00001.500

Description : Multi-process regulation.circadian clock.morning element regulation.LWD activation factor


Gene families : OG0002975 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002975_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00271900

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene25963.t1 LWD1, ATAN11,... circadian clock activation factor *(LWD) & original... 0.03 OrthoFinder output from all 47 species
Gb_40146 LWD1, ATAN11 WD repeat-containing protein LWD1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os02g32430.1 LWD1, ATAN11,... WD repeat-containing protein LWD1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os02g45810.1 ATTTG1, TTG,... Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Pp3c21_21010V3.1 LWD1, ATAN11,... Transducin/WD40 repeat-like superfamily protein 0.02 OrthoFinder output from all 47 species
Spa_g06620 LWD1, ATAN11 circadian clock activation factor *(LWD) & original... 0.04 OrthoFinder output from all 47 species
Tin_g01914 LWD1, ATAN11 circadian clock activation factor *(LWD) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 163 196
IPR001680 WD40_repeat 250 287
No external refs found!