Aliases : AtMYB98, MYB98, evm_27.TU.AmTr_v1.0_scaffold00001.525
Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor
Gene families : OG0000080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000080_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00001p00272410 | |
| Cluster | HCCA: Cluster_12 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G26780 | AtMYB117, LOF1, MYB117 | myb domain protein 117 | 0.05 | OrthoFinder output from all 47 species | |
| AT1G69560 | LOF2, MYB105, ATMYB105 | myb domain protein 105 | 0.03 | OrthoFinder output from all 47 species | |
| AT1G73410 | MYB54, ATMYB54 | myb domain protein 54 | 0.02 | OrthoFinder output from all 47 species | |
| AT3G27785 | PGA37, ATMYB118, MYB118 | myb domain protein 118 | 0.03 | OrthoFinder output from all 47 species | |
| AT3G29020 | MYB110, AtMYB110 | myb domain protein 110 | 0.04 | OrthoFinder output from all 47 species | |
| AT3G50060 | MYB77 | myb domain protein 77 | 0.03 | OrthoFinder output from all 47 species | |
| AT4G18770 | AtMYB98, MYB98 | myb domain protein 98 | 0.03 | OrthoFinder output from all 47 species | |
| AT4G33450 | ATMYB69, MYB69 | myb domain protein 69 | 0.03 | OrthoFinder output from all 47 species | |
| AT5G11050 | MYB64, AtMYB64 | myb domain protein 64 | 0.03 | OrthoFinder output from all 47 species | |
| AT5G17800 | MYB56, AtMYB56 | myb domain protein 56 | 0.05 | OrthoFinder output from all 47 species | |
| AT5G58850 | ATMYB119, MYB119 | myb domain protein 119 | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g01523 | MYB77 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g03504 | BW52, ATMYB52, MYB52 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g27236 | BW52, ATMYB52, MYB52 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g15721 | LOF2, MYB105, ATMYB105 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g47836 | MYB3R-1,... | R1R2R3-MYB transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g38260 | MYB56, AtMYB56 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene14847.t1 | MYB70, AtMYB70,... | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene54282.t1 | MYB1, AtMYB1,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene63601.t1 | LOF2, MYB105,... | MYB class-R2R3 subgroup-21 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene66011.t1 | MYB77, Aspi01Gene66011 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene69493.t1 | LOF2, MYB105,... | MYB class-R2R3 subgroup-21 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0105.g044929 | AtMYB117, LOF1, MYB117 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0130.g049054 | MYB54, ATMYB54 | not classified & original description: CDS=1-720 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s1025.g095454 | ATMYB3R5, MYB3R-5 | R1R2R3-MYB transcription factor & original description: CDS=1-468 | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.03G075000.1 | MYB56, AtMYB56,... | MYB class-R2R3 subgroup-21 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.19G007400.1 | LOF2, MYB105,... | MYB class-R2R3 subgroup-21 transcription factor &... | 0.04 | OrthoFinder output from all 47 species | |
| Cre07.g345350 | MYBR1, MYB44,... | RNA biosynthesis.transcriptional activation.MYB... | 0.01 | OrthoFinder output from all 47 species | |
| Dde_g02281 | ATMYB3R5, MYB3R-5 | R1R2R3-MYB transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g28841 | LOF2, MYB105, ATMYB105 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g05817 | MYB77 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01009566001 | MYB70, AtMYB70 | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01016393001 | AtMYB109, MYB109 | RNA biosynthesis.transcriptional activation.MYB... | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01019967001 | AtMYB117, LOF1, MYB117 | RNA biosynthesis.transcriptional activation.MYB... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01020038001 | MYB88, AtMYB88 | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01029941001 | LOF2, MYB105, ATMYB105 | RNA biosynthesis.transcriptional activation.MYB... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_01889 | BW52, ATMYB52, MYB52 | transcription factor (MYB) | 0.03 | OrthoFinder output from all 47 species | |
| Gb_06298 | AtMYB117, LOF1, MYB117 | transcription factor (MYB) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g16810.1 | LOF2, MYB105,... | transcription factor (MYB) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g74590.1 | MYBR1, MYB44,... | transcription factor (MYB) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g08590.1 | LOC_Os04g08590 | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os11g10130.1 | BW52, ATMYB52,... | transcription factor (MYB) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g07610.1 | AtMYB98, MYB98,... | transcription factor (MYB) | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g28242 | MYB73, ATMYB73 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
| MA_120049g0010 | MYBR1, MYB44,... | transcription factor (MYB) | 0.01 | OrthoFinder output from all 47 species | |
| Mp4g09880.1 | MYB3R-3, AtMYB3R3 | transcription factor (MYB) | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g11139 | MYBR1, MYB44,... | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g11561 | MYB77 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g33238 | MYB3R-1,... | R1R2R3-MYB transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g08134 | MYB3R-1,... | R1R2R3-MYB transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g02255 | ATMYB3R5, MYB3R-5 | R1R2R3-MYB transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g12915 | AtMYB124, MYB124, FLP | MYB class-R2R3 transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0031.g010615 | AtMYB98, MYB98 | MYB class-R2R3 transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0067.g016320 | MYB3R-1,... | not classified & original description: CDS=302-2611 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0129.g021926 | LOF2, MYB105, ATMYB105 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
| Smo6091 | AtMYB117, LOF1, MYB117 | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g112890.1.1 | AtMYB98, MYB98,... | transcription factor (MYB) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g076840.3.1 | ATMYB119,... | transcription factor (MYB) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc09g011780.3.1 | MYB1, AtMYB1,... | transcription factor (MYB) | 0.01 | OrthoFinder output from all 47 species | |
| Tin_g28496 | LOF2, MYB105, ATMYB105 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e005044_P002 | ATMYB119,... | transcription factor (MYB) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e013910_P001 | MYB77, Zm00001e013910 | transcription factor (MYB) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | HCCA |
| MF | GO:0004650 | polygalacturonase activity | IEP | HCCA |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
| MF | GO:0009055 | electron transfer activity | IEP | HCCA |
| MF | GO:0015035 | protein-disulfide reductase activity | IEP | HCCA |
| MF | GO:0015036 | disulfide oxidoreductase activity | IEP | HCCA |
| MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | HCCA |
| BP | GO:0042545 | cell wall modification | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
