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  5. AMTR_s00001p00272630

AMTR_s00001p00272630 (ATPB, PB,...)


Aliases : ATPB, PB, evm_27.TU.AmTr_v1.0_scaffold00001.547

Description : ATP synthase subunit beta, chloroplastic OS=Amborella trichopoda


Gene families : OG0000973 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000973_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00272630
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
Aev_g10806 ATPB, PB subunit beta of peripheral CF1 subcomplex of ATP... 0.05 OrthoFinder output from all 47 species
Aob_g06682 ATPB, PB subunit beta of peripheral CF1 subcomplex of ATP... 0.03 OrthoFinder output from all 47 species
Dcu_g20874 ATPB, PB subunit beta of peripheral CF1 subcomplex of ATP... 0.03 OrthoFinder output from all 47 species
Gb_00175 ATPB, PB ATP synthase subunit beta, chloroplastic OS=Picea abies... 0.02 OrthoFinder output from all 47 species
Gb_22349 ATPB, PB subunit beta of peripheral CF1 subcomplex of ATP synthase complex 0.02 OrthoFinder output from all 47 species
LOC_Os05g35320.1 ATPB, PB, LOC_Os05g35320 ATP synthase subunit beta, chloroplastic OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Lfl_g05507 ATPB, PB subunit beta of peripheral CF1 subcomplex of ATP... 0.05 OrthoFinder output from all 47 species
Ore_g00399 ATPB, PB subunit beta of peripheral CF1 subcomplex of ATP... 0.03 OrthoFinder output from all 47 species
Solyc04g039850.1.1 ATPB, PB, Solyc04g039850 ATP synthase subunit beta, chloroplastic OS=Agapanthus... 0.03 OrthoFinder output from all 47 species
Solyc07g021180.3.1 ATPB, PB, Solyc07g021180 ATP synthase subunit beta, chloroplastic OS=Nicotiana... 0.03 OrthoFinder output from all 47 species
Solyc07g062000.2.1 ATPB, PB, Solyc07g062000 ATP synthase subunit beta, chloroplastic OS=Nicotiana... 0.03 OrthoFinder output from all 47 species
Solyc12g062530.3.1 ATPB, PB, Solyc12g062530 ATP synthase subunit beta, chloroplastic OS=Solanum... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000194 ATPase_F1/V1/A1_a/bsu_nucl-bd 165 249
No external refs found!