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  5. AMTR_s00002p00017020

AMTR_s00002p00017020 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00002.6

Description : RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.SYF2 component


Gene families : OG0003956 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003956_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00002p00017020

Target Alias Description ECC score Gene Family Method Actions
AT2G16860 No alias GCIP-interacting family protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005674 transcription factor TFIIF complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR013260 mRNA_splic_SYF2 57 204
No external refs found!