AMTR_s00002p00090370 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00002.46

Description : PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana


Gene families : OG0000198 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000198_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00002p00090370

Target Alias Description ECC score Gene Family Method Actions
AT1G18650 PDCB3 plasmodesmata callose-binding protein 3 0.02 OrthoFinder output from all 47 species
AT1G69295 PDCB4 plasmodesmata callose-binding protein 4 0.03 OrthoFinder output from all 47 species
AT1G79480 No alias Carbohydrate-binding X8 domain superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G05430 No alias Carbohydrate-binding X8 domain superfamily protein 0.03 OrthoFinder output from all 47 species
Ala_g14411 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g00233 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene04282.t1 Aspi01Gene04282 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene48986.t1 Aspi01Gene48986 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g09344 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.27G013100.1 Ceric.27G013100 not classified & original description: pacid=50605460... 0.02 OrthoFinder output from all 47 species
Dac_g03506 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g08788 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_00480 No alias Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os03g30830.1 PDCB2, E13L3,... PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os05g50490.3 LOC_Os05g50490 Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os07g40940.1 PDCB2, E13L3,... PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g29067 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g18419 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30722 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g55633 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16036 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g33619 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g36355 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g000901 No alias not classified & original description: CDS=512-1180 0.03 OrthoFinder output from all 47 species
Sam_g31368 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g010310.4.1 Solyc01g010310 PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc05g016390.4.1 Solyc05g016390 Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc12g098410.2.1 Solyc12g098410 PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g28067 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29731 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g13221 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20543 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005720_P001 PDCB2, E13L3,... PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e032121_P001 PDCB1, Zm00001e032121 Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR012946 X8 266 336
No external refs found!