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  5. AMTR_s00002p00198340

AMTR_s00002p00198340 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00002.184

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00002p00198340
Cluster HCCA: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00223430 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AMTR_s00077p00070720 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AT2G27940 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT2G35000 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G18773 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G24015 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G30370 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G01880 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G07040 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G27420 ATL31, CNI1 carbon/nitrogen insensitive 1 0.02 OrthoFinder output from all 47 species
AT5G42200 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g049763 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g069237 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Adi_g117766 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aev_g03304 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aev_g15196 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aev_g38248 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g08457 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g28428 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g29027 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g13439 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Aop_g07686 ATL6 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Aop_g13275 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aop_g20499 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aop_g48822 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aop_g60107 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene00937.t1 BRH1, Aspi01Gene00937 E3 ubiquitin ligase *(BRH) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27966.t1 Aspi01Gene27966 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene28894.t1 BRH1, Aspi01Gene28894 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene28895.t2 BRH1, Aspi01Gene28895 E3 ubiquitin ligase *(BRH) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene30805.t1 ATL2, TL2,... RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene36586.t1 Aspi01Gene36586 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene37205.t2 Aspi01Gene37205 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene43910.t1 Aspi01Gene43910 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene49237.t1 ATL2, TL2,... RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene63855.t1 Aspi01Gene63855 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene70935.t1 ATL6, Aspi01Gene70935 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Azfi_s0048.g030554 No alias not classified & original description: CDS=1-690 0.04 OrthoFinder output from all 47 species
Azfi_s0061.g035115 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Azfi_s0179.g056226 ATL4H not classified & original description: CDS=1-969 0.05 OrthoFinder output from all 47 species
Azfi_s0385.g067521 RHA3B RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Cba_g27531 ATL4H RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.01G091800.1 Ceric.01G091800 not classified & original description: pacid=50591615... 0.02 OrthoFinder output from all 47 species
Ceric.01G098400.1 Ceric.01G098400 not classified & original description: pacid=50591772... 0.02 OrthoFinder output from all 47 species
Ceric.05G094800.1 ATL4H, Ceric.05G094800 not classified & original description: pacid=50578003... 0.03 OrthoFinder output from all 47 species
Ceric.06G080900.1 Ceric.06G080900 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ceric.07G057700.1 Ceric.07G057700 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.06 OrthoFinder output from all 47 species
Ceric.09G091300.1 Ceric.09G091300 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.06 OrthoFinder output from all 47 species
Ceric.15G075700.1 Ceric.15G075700 not classified & original description: pacid=50639640... 0.05 OrthoFinder output from all 47 species
Ceric.18G058800.1 Ceric.18G058800 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.21G001100.1 ATL2, TL2,... RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.22G061600.1 ATL2, TL2,... RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ceric.25G065800.1 Ceric.25G065800 not classified & original description: pacid=50593831... 0.03 OrthoFinder output from all 47 species
Ceric.29G080000.1 ATL31, CNI1,... not classified & original description: pacid=50625053... 0.03 OrthoFinder output from all 47 species
Dac_g11553 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dac_g14726 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Dac_g31595 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g21102 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Dcu_g49887 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g09101 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g40050 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ehy_g06688 MEE16 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ehy_g26675 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ehy_g29562 ATL2, TL2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01012015001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
GSVIVT01012018001 XERICO Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
GSVIVT01012022001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
GSVIVT01032684001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Gb_05386 No alias RHA2 signal transducer of abscisic acid perception 0.06 OrthoFinder output from all 47 species
Gb_14778 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Gb_15836 No alias RING-H2-class E3 ligase 0.06 OrthoFinder output from all 47 species
Gb_20700 BRH1 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_20844 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_32878 No alias RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Gb_36232 No alias IDF1 iron uptake IRT1-ubiquitin ligase 0.02 OrthoFinder output from all 47 species
Gb_40635 RHA2A RHA2 signal transducer of abscisic acid perception 0.04 OrthoFinder output from all 47 species
LOC_Os01g20930.1 ATL3, LOC_Os01g20930 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g60730.2 LOC_Os01g60730 RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os02g52210.1 ATL31, CNI1,... RING-H2-class E3 ligase 0.05 OrthoFinder output from all 47 species
LOC_Os03g05560.1 LOC_Os03g05560 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os05g29676.1 LOC_Os05g29676 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os05g29710.1 LOC_Os05g29710 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
LOC_Os05g36310.1 LOC_Os05g36310 RING-H2 finger protein ATL77 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os09g36500.1 RHA3A, LOC_Os09g36500 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g00972 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Len_g29871 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Len_g53832 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
MA_129306g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_13397g0010 No alias RING-H2 finger protein ATL73 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_189618g0010 ATL8 RING-H2-class E3 ligase 0.05 OrthoFinder output from all 47 species
MA_222729g0010 ATL2, TL2 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
MA_226198g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_31736g0010 BRH1 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_391931g0010 No alias RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
MA_43543g0010 ATL2, TL2 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
MA_46635g0010 BRH1 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_8362328g0010 XERICO Probable E3 ubiquitin-protein ligase XERICO... 0.04 OrthoFinder output from all 47 species
MA_8556123g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_96368g0010 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Mp4g04600.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp7g06030.1 No alias RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Msp_g00957 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g01017 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g36544 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g00299 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Nbi_g02407 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Nbi_g03518 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Nbi_g07839 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Nbi_g08090 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ore_g00818 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Ore_g27916 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28091 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ore_g29694 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ore_g41633 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Pir_g02769 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Pir_g06078 RHA3B RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Pir_g15924 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Pir_g15928 ATL5 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Pir_g17673 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Pir_g18035 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Pir_g46507 BRH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g55293 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.07 OrthoFinder output from all 47 species
Ppi_g09527 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000797 ATL8 not classified & original description: CDS=1-573 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013072 ATL8 not classified & original description: CDS=1-573 0.03 OrthoFinder output from all 47 species
Sam_g25474 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo412606 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
Smo417984 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc03g123690.1.1 Solyc03g123690 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc04g009780.1.1 Solyc04g009780 Putative RING-H2 finger protein ATL71 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Solyc04g074820.3.1 Solyc04g074820 RING-H2-class E3 ligase 0.05 OrthoFinder output from all 47 species
Solyc06g051250.1.1 Solyc06g051250 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
Solyc09g089890.1.1 Solyc09g089890 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Solyc10g009487.1.1 Solyc10g009487 RING-H2 finger protein ATL20 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc11g005280.1.1 Solyc11g005280 RING-H2-class E3 ligase 0.07 OrthoFinder output from all 47 species
Solyc11g005300.2.1 Solyc11g005300 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Solyc11g007530.2.1 Solyc11g007530 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
Solyc11g010330.3.1 Solyc11g010330 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Solyc11g066510.3.1 Solyc11g066510 RING-H2-class E3 ligase 0.05 OrthoFinder output from all 47 species
Spa_g17343 ATL6 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.06 OrthoFinder output from all 47 species
Spa_g29342 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30280 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Spa_g42318 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g00996 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.04 OrthoFinder output from all 47 species
Tin_g30825 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.04 OrthoFinder output from all 47 species
Tin_g31919 BRH1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e007157_P001 Zm00001e007157 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e008560_P001 RHA2A, Zm00001e008560 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e009766_P001 Zm00001e009766 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e023260_P001 Zm00001e023260 RING-H2-class E3 ligase 0.05 OrthoFinder output from all 47 species
Zm00001e030136_P001 Zm00001e030136 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e039314_P001 Zm00001e039314 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 143 187
No external refs found!