AMTR_s00002p00268140 (AtbZIP63, BZO2H3,...)

Aliases : AtbZIP63, BZO2H3, evm_27.TU.AmTr_v1.0_scaffold00002.534

Description : RNA biosynthesis.transcriptional activation.bZIP superfamily.bZIP9/10/25 transcription factor

Gene families : OG0000391 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000391_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00002p00268140
Cluster	HCCA: Cluster_85

Target	Alias	Description	ECC score	Gene Family Method
Azfi_s0096.g043718	AtbZIP63, BZO2H3	bZIP class-C transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ceric.06G042100.1	AtbZIP3, bZIP3,...	bZIP class-S/SE transcription factor & original...	0.03	OrthoFinder output from all 47 species
Dac_g00297	bZIP44, AtbZIP44	bZIP class-S/SE transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g23093	bZIP58, AtbZIP58	bZIP class-S/SE transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
LOC_Os03g58250.1	AtbZIP63,...	transcription factor (bZIP). transcription factor (bZIP9/10/25)	0.03	OrthoFinder output from all 47 species
Msp_g10694	bZIP44, AtbZIP44	bZIP class-S/SE transcription factor & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001522	pseudouridine synthesis	IEP	HCCA
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0004721	phosphoprotein phosphatase activity	IEP	HCCA
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
CC	GO:0005681	spliceosomal complex	IEP	HCCA
BP	GO:0006470	protein dephosphorylation	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
MF	GO:0008138	protein tyrosine/serine/threonine phosphatase activity	IEP	HCCA
BP	GO:0008380	RNA splicing	IEP	HCCA
BP	GO:0009451	RNA modification	IEP	HCCA
MF	GO:0009982	pseudouridine synthase activity	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
BP	GO:0016311	dephosphorylation	IEP	HCCA
MF	GO:0016791	phosphatase activity	IEP	HCCA
MF	GO:0016866	intramolecular transferase activity	IEP	HCCA
MF	GO:0016881	acid-amino acid ligase activity	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	585	615
IPR002885	Pentatricopeptide_repeat	616	640
IPR002885	Pentatricopeptide_repeat	557	581
IPR002885	Pentatricopeptide_repeat	483	530
IPR020983	Basic_leucine-zipper_C	281	397
IPR004827	bZIP	212	268

External Links

No external refs found!

AMTR_s00002p00268140 (AtbZIP63, BZO2H3,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation