AMTR_s00002p00270100 (SOS5,...)


Aliases : SOS5, evm_27.TU.AmTr_v1.0_scaffold00002.569

Description : External stimuli response.salinity.SOS (Salt Overly Sensitive) signalling pathway.SOS5 component


Gene families : OG0000786 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000786_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00002p00270100

Target Alias Description ECC score Gene Family Method Actions
Cba_g02532 FLA10 Fasciclin-type arabinogalactan protein & original... 0.03 OrthoFinder output from all 47 species
Dde_g24847 FLA10 Fasciclin-type arabinogalactan protein & original... 0.04 OrthoFinder output from all 47 species
Ehy_g03525 FLA10 Fasciclin-type arabinogalactan protein & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01014684001 FLA1 Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
GSVIVT01024973001 SOS5 External stimuli response.salinity.SOS (Salt Overly... 0.04 OrthoFinder output from all 47 species
Gb_05461 No alias fasciclin-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Gb_27317 SOS5 fasciclin-type arabinogalactan protein. regulatory... 0.02 OrthoFinder output from all 47 species
LOC_Os01g62380.1 SOS5, LOC_Os01g62380 fasciclin-type arabinogalactan protein. regulatory... 0.03 OrthoFinder output from all 47 species
Solyc01g091530.4.1 FLA10, Solyc01g091530 classical arabinogalactan protein. fasciclin-type... 0.02 OrthoFinder output from all 47 species
Solyc10g005960.1.1 FLA1, Solyc10g005960 fasciclin-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0050662 obsolete coenzyme binding IEP HCCA
InterPro domains Description Start Stop
IPR000782 FAS1_domain 188 322
IPR000782 FAS1_domain 20 100
No external refs found!