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  5. AMTR_s00002p00271180

AMTR_s00002p00271180 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00002.613

Description : Carbohydrate metabolism.oxidative pentose phosphate pathway.non-oxidative phase.ribose 5-phosphate isomerase


Gene families : OG0003243 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003243_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00002p00271180

Target Alias Description ECC score Gene Family Method Actions
AT3G04790 No alias Ribose 5-phosphate isomerase, type A protein 0.07 OrthoFinder output from all 47 species
Aev_g04500 No alias EC_5.3 intramolecular oxidoreductase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g11265 No alias EC_5.3 intramolecular oxidoreductase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g48216 No alias EC_5.3 intramolecular oxidoreductase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.16G077200.1 Ceric.16G077200 EC_5.3 intramolecular oxidoreductase & original... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000551.5 No alias Carbohydrate metabolism.oxidative pentose phosphate... 0.02 OrthoFinder output from all 47 species
Cre03.g187450 No alias Carbohydrate metabolism.oxidative pentose phosphate... 0.01 OrthoFinder output from all 47 species
Dac_g15950 No alias EC_5.3 intramolecular oxidoreductase & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g34490 No alias EC_5.3 intramolecular oxidoreductase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g44231 No alias EC_5.3 intramolecular oxidoreductase & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g14329 No alias EC_5.3 intramolecular oxidoreductase & original description: none 0.09 OrthoFinder output from all 47 species
Ehy_g05556 No alias EC_5.3 intramolecular oxidoreductase & original description: none 0.06 OrthoFinder output from all 47 species
LOC_Os07g08030.1 LOC_Os07g08030 phosphopentose isomerase. ribose 5-phosphate isomerase 0.07 OrthoFinder output from all 47 species
Len_g30006 No alias EC_5.3 intramolecular oxidoreductase & original description: none 0.08 OrthoFinder output from all 47 species
Lfl_g02754 No alias EC_5.3 intramolecular oxidoreductase & original description: none 0.02 OrthoFinder output from all 47 species
MA_10435626g0040 No alias phosphopentose isomerase. ribose 5-phosphate isomerase 0.02 OrthoFinder output from all 47 species
Mp8g18400.1 No alias phosphopentose isomerase. ribose 5-phosphate isomerase 0.04 OrthoFinder output from all 47 species
Msp_g29121 No alias EC_5.3 intramolecular oxidoreductase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g38416 No alias EC_5.3 intramolecular oxidoreductase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03389 No alias EC_5.3 intramolecular oxidoreductase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g10042 No alias EC_5.3 intramolecular oxidoreductase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g10043 No alias EC_5.3 intramolecular oxidoreductase & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g06605 No alias EC_5.3 intramolecular oxidoreductase & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c5_21490V3.1 Pp3c5_21490 Ribose 5-phosphate isomerase, type A protein 0.02 OrthoFinder output from all 47 species
Ppi_g46049 No alias EC_5.3 intramolecular oxidoreductase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0070.g016705 No alias EC_5.3 intramolecular oxidoreductase & original... 0.02 OrthoFinder output from all 47 species
Sam_g16880 No alias EC_5.3 intramolecular oxidoreductase & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g30055 No alias EC_5.3 intramolecular oxidoreductase & original description: none 0.08 OrthoFinder output from all 47 species
Smo74055 No alias Carbohydrate metabolism.oxidative pentose phosphate... 0.05 OrthoFinder output from all 47 species
Solyc01g097460.3.1 Solyc01g097460 phosphopentose isomerase. ribose 5-phosphate isomerase 0.08 OrthoFinder output from all 47 species
Spa_g22712 No alias EC_5.3 intramolecular oxidoreductase & original description: none 0.09 OrthoFinder output from all 47 species
Zm00001e032919_P001 Zm00001e032919 phosphopentose isomerase. ribose 5-phosphate isomerase 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004751 ribose-5-phosphate isomerase activity IEA Interproscan
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR004788 Ribose5P_isomerase_type_A 103 280
No external refs found!