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  5. AMTR_s00002p00271240

AMTR_s00002p00271240 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00002.616

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase


Gene families : OG0000957 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000957_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00002p00271240

Target Alias Description ECC score Gene Family Method Actions
AT1G49850 No alias RING/U-box superfamily protein 0.01 OrthoFinder output from all 47 species
Aev_g09131 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07198 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08524 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene37987.t1 Aspi01Gene37987 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene65915.t1 Aspi01Gene65915 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene69535.t1 Aspi01Gene69535 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0350.g066538 No alias not classified & original description: CDS=422-1165 0.01 OrthoFinder output from all 47 species
Cba_g12037 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.25G032100.1 Ceric.25G032100 not classified & original description: pacid=50594388... 0.01 OrthoFinder output from all 47 species
Dac_g09830 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g23290 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g45444 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g00862 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13691 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g16986 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g18598 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g52517 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0065.g016023 No alias not classified & original description: CDS=44-961 0.01 OrthoFinder output from all 47 species
Sam_g15125 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g007170.3.1 Solyc07g007170 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g12079 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g17928 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Tin_g20892 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 88 131
No external refs found!