Aliases : TSO1, ATTSO1, evm_27.TU.AmTr_v1.0_scaffold00002.637
Description : RNA biosynthesis.transcriptional activation.CPP1-like transcription factor
Gene families : OG0001700 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001700_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00002p00271710 | |
| Cluster | HCCA: Cluster_58 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g081377 | SOL1 | TCX/CPP-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g089273 | TCX2, ATTCX2 | TCX/CPP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g14241 | TSO1, ATTSO1 | TCX/CPP-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g07596 | SOL1 | TCX/CPP-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene03280.t1 | TSO1, ATTSO1,... | TCX/CPP-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene06674.t2 | TSO1, ATTSO1,... | TCX/CPP-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene42162.t1 | SOL1, Aspi01Gene42162 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0037.g026007 | SOL1 | TCX/CPP-type transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0114.g046064 | SOL1 | TCX/CPP-type transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g21027 | SOL1 | TCX/CPP-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01018021001 | TCX2, ATTCX2 | RNA biosynthesis.transcriptional activation.CPP1-like... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g06810 | SOL1 | TCX/CPP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g17407 | SOL1 | TCX/CPP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g38475 | No alias | TCX/CPP-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g29190 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g50353 | SOL1 | TCX/CPP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000271 | polysaccharide biosynthetic process | IEP | HCCA |
| MF | GO:0003924 | GTPase activity | IEP | HCCA |
| MF | GO:0004857 | enzyme inhibitor activity | IEP | HCCA |
| CC | GO:0005618 | cell wall | IEP | HCCA |
| BP | GO:0005976 | polysaccharide metabolic process | IEP | HCCA |
| BP | GO:0006073 | cellular glucan metabolic process | IEP | HCCA |
| BP | GO:0006184 | obsolete GTP catabolic process | IEP | HCCA |
| MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | HCCA |
| BP | GO:0009250 | glucan biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0016043 | cellular component organization | IEP | HCCA |
| BP | GO:0016051 | carbohydrate biosynthetic process | IEP | HCCA |
| MF | GO:0016759 | cellulose synthase activity | IEP | HCCA |
| MF | GO:0016760 | cellulose synthase (UDP-forming) activity | IEP | HCCA |
| BP | GO:0022607 | cellular component assembly | IEP | HCCA |
| MF | GO:0030234 | enzyme regulator activity | IEP | HCCA |
| BP | GO:0030243 | cellulose metabolic process | IEP | HCCA |
| BP | GO:0030244 | cellulose biosynthetic process | IEP | HCCA |
| CC | GO:0030312 | external encapsulating structure | IEP | HCCA |
| MF | GO:0030599 | pectinesterase activity | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | HCCA |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | HCCA |
| MF | GO:0035251 | UDP-glucosyltransferase activity | IEP | HCCA |
| BP | GO:0042545 | cell wall modification | IEP | HCCA |
| BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
| BP | GO:0044042 | glucan metabolic process | IEP | HCCA |
| BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | HCCA |
| BP | GO:0045229 | external encapsulating structure organization | IEP | HCCA |
| MF | GO:0046527 | glucosyltransferase activity | IEP | HCCA |
| BP | GO:0051258 | protein polymerization | IEP | HCCA |
| BP | GO:0051273 | beta-glucan metabolic process | IEP | HCCA |
| BP | GO:0051274 | beta-glucan biosynthetic process | IEP | HCCA |
| BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
| BP | GO:0071554 | cell wall organization or biogenesis | IEP | HCCA |
| BP | GO:0071555 | cell wall organization | IEP | HCCA |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0098772 | molecular function regulator activity | IEP | HCCA |
| MF | GO:0140678 | molecular function inhibitor activity | IEP | HCCA |
| No external refs found! |
