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  5. AMTR_s00003p00157400

AMTR_s00003p00157400 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00003.130

No description available


Gene families : OG0008848 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008848_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00003p00157400
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
Adi_g013830 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g043504 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g02182 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene01007.t1 Aspi01Gene01007 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g47100 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_29700 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pir_g10033 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g06941 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g54927 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005199 structural constituent of cell wall IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0008378 galactosyltransferase activity IEP HCCA
MF GO:0008762 UDP-N-acetylmuramate dehydrogenase activity IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA

No InterPro domains available for this sequence

No external refs found!