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  5. AMTR_s00003p00240920

AMTR_s00003p00240920 (ATL2, TL2,...)


Aliases : ATL2, TL2, evm_27.TU.AmTr_v1.0_scaffold00003.255

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00003p00240920

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00200880 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
AMTR_s00044p00221710 RHA2A,... Protein degradation.peptide tagging.Ubiquitin... 0.05 OrthoFinder output from all 47 species
AT3G60966 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g088636 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Adi_g105077 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g04809 BRH1 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Als_g31953 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene28895.t1 BRH1, Aspi01Gene28895 E3 ubiquitin ligase *(BRH) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0351.g066574 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Azfi_s0436.g069938 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ceric.06G045100.1 Ceric.06G045100 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ceric.07G058000.1 Ceric.07G058000 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ceric.09G083800.1 Ceric.09G083800 not classified & original description: pacid=50587862... 0.04 OrthoFinder output from all 47 species
Ceric.13G075200.1 Ceric.13G075200 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ceric.18G057500.1 Ceric.18G057500 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dcu_g05475 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dde_g01399 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26675 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
GSVIVT01015682001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Gb_00010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_28980 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g64620.1 LOC_Os01g64620 RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os02g15020.1 LOC_Os02g15020 RING-H2-class E3 ligase 0.05 OrthoFinder output from all 47 species
LOC_Os04g49000.1 BRH1, LOC_Os04g49000 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g37760.1 ATL6, LOC_Os08g37760 RING-H2-class E3 ligase 0.06 OrthoFinder output from all 47 species
LOC_Os09g29310.1 ATL6, LOC_Os09g29310 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
MA_10260361g0010 No alias RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
MA_132693g0010 No alias RING-H2-class E3 ligase 0.07 OrthoFinder output from all 47 species
MA_184439g0010 No alias RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
MA_223372g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_37578g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_552961g0010 No alias RING-H2 finger protein ATL70 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
MA_77628g0010 ATL2, TL2 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
MA_8362328g0010 XERICO Probable E3 ubiquitin-protein ligase XERICO... 0.04 OrthoFinder output from all 47 species
Ore_g06948 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g17145 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17146 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g14736 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Pir_g38125 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.08 OrthoFinder output from all 47 species
Pir_g49925 No alias regulatory ubiquitin-protein ligase *(PRU2) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g42004 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Sam_g34706 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc10g009487.1.1 Solyc10g009487 RING-H2 finger protein ATL20 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g26809 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.06 OrthoFinder output from all 47 species
Spa_g55700 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Zm00001e000398_P001 Zm00001e000398 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e007208_P002 Zm00001e007208 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e018028_P001 Zm00001e018028 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e019438_P001 Zm00001e019438 RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Zm00001e022781_P001 Zm00001e022781 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e030102_P001 Zm00001e030102 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e035560_P001 ATL3, Zm00001e035560 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e041409_P001 BRH1, Zm00001e041409 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006541 glutamine metabolic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 101 145
No external refs found!