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  5. AMTR_s00004p00061310

AMTR_s00004p00061310 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00004.43

No description available


Gene families : OG0001862 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001862_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00004p00061310
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
AT4G09830 No alias Uncharacterised conserved protein UCP009193 0.06 OrthoFinder output from all 47 species
Cba_g42984 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g01317 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12757 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g00549 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g03968 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e020565_P001 Zm00001e020565 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!