AMTR_s00004p00076010 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00004.59

Description : Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00004p00076010
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
AT1G11290 CRR22 Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G15510 VAC1, ECB2, ATECB2 Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT1G18485 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
AT2G02980 OTP85 Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G22150 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G49710 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G57430 OTP84 Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G61170 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G63370 OTP86 Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g003303 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g005534 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g009482 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g011924 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g014833 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g015939 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g017104 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g023027 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036862 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g040548 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g056053 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g056798 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g057031 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g059237 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g061137 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g066076 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g066849 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g067809 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g069188 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g082441 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g082818 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g086048 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g086894 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g089039 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g096243 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g097219 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g101065 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g101112 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g101185 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g113573 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g02126 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g12197 OSB1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g44555 No alias ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g02938 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g06818 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g06921 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07106 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g17235 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g18741 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g24099 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g36191 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36210 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g36514 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g36540 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g37466 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g12353 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18237 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18499 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19051 DOT4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19281 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19305 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30905 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g55325 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g09079 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g11093 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27296 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g03233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18871 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26873 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g30689 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67897 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14821.t1 CRR2, Aspi01Gene14821 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene32466.t1 Aspi01Gene32466 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34799.t1 Aspi01Gene34799 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene48516.t1 Aspi01Gene48516 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56635.t1 Aspi01Gene56635 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0128.g048744 No alias not classified & original description: CDS=1-2109 0.02 OrthoFinder output from all 47 species
Azfi_s0220.g058688 No alias not classified & original description: CDS=170-3529 0.03 OrthoFinder output from all 47 species
Azfi_s0332.g065427 No alias not classified & original description: CDS=1-3180 0.03 OrthoFinder output from all 47 species
Cba_g05301 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06542 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07325 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07614 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g12686 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g13797 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g16610 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g19915 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g23385 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g31693 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34773 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g35110 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g67804 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.04G036800.1 Ceric.04G036800 not classified & original description: pacid=50632550... 0.03 OrthoFinder output from all 47 species
Ceric.10G062000.1 Ceric.10G062000 ssDNA-binding protein *(OSB) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.11G015200.1 Ceric.11G015200 not classified & original description: pacid=50595684... 0.03 OrthoFinder output from all 47 species
Ceric.11G078400.1 Ceric.11G078400 not classified & original description: pacid=50596841... 0.03 OrthoFinder output from all 47 species
Ceric.11G085300.1 Ceric.11G085300 not classified & original description: pacid=50596385... 0.03 OrthoFinder output from all 47 species
Ceric.14G074100.1 Ceric.14G074100 not classified & original description: pacid=50633188... 0.03 OrthoFinder output from all 47 species
Ceric.1Z079200.1 CRR22, Ceric.1Z079200 not classified & original description: pacid=50582193... 0.03 OrthoFinder output from all 47 species
Ceric.20G040700.1 Ceric.20G040700 not classified & original description: pacid=50566494... 0.03 OrthoFinder output from all 47 species
Ceric.23G060300.1 CRR22, Ceric.23G060300 not classified & original description: pacid=50610371... 0.02 OrthoFinder output from all 47 species
Ceric.23G076700.1 OTP84, Ceric.23G076700 not classified & original description: pacid=50610256... 0.03 OrthoFinder output from all 47 species
Ceric.27G011400.1 Ceric.27G011400 not classified & original description: pacid=50605728... 0.05 OrthoFinder output from all 47 species
Ceric.30G066500.1 Ceric.30G066500 not classified & original description: pacid=50608384... 0.03 OrthoFinder output from all 47 species
Ceric.31G032400.1 CRR22, Ceric.31G032400 not classified & original description: pacid=50574168... 0.03 OrthoFinder output from all 47 species
Ceric.32G058000.1 Ceric.32G058000 not classified & original description: pacid=50598467... 0.03 OrthoFinder output from all 47 species
Ceric.33G050800.1 CRR22, Ceric.33G050800 not classified & original description: pacid=50606654... 0.03 OrthoFinder output from all 47 species
Ceric.36G012600.1 Ceric.36G012600 not classified & original description: pacid=50568766... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001657.6 No alias No description available 0.03 OrthoFinder output from all 47 species
Dac_g03777 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g05753 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g19071 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g21997 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g23705 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g05737 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g05754 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g06366 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06464 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g06472 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g07737 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07753 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g07762 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08263 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08560 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08687 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08760 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08876 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08927 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g10377 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g16805 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g17298 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g21492 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g22451 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g22763 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g35962 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g36545 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g37149 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g37501 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g40896 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g43169 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g43282 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g43321 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g45932 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g46370 MEF1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g47764 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g47918 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g47933 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50115 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g02941 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g02951 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g03570 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g03967 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05343 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g05938 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g05957 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09930 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10498 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15911 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16100 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16419 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g16421 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g16644 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g18063 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21670 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g21679 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22014 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22176 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22330 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22604 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22994 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g23579 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23602 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23821 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g24540 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25445 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g25743 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g26461 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g29906 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g30703 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g35725 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g36355 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g41966 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g47197 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g47764 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g47826 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g47962 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g50096 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50253 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01000244001 No alias Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
GSVIVT01003124001 OTP86 Pentatricopeptide repeat-containing protein At3g63370,... 0.04 OrthoFinder output from all 47 species
GSVIVT01008965001 No alias Pentatricopeptide repeat-containing protein At4g18520,... 0.03 OrthoFinder output from all 47 species
GSVIVT01009227001 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.05 OrthoFinder output from all 47 species
GSVIVT01009407001 EMB2261 Pentatricopeptide repeat-containing protein At2g27610... 0.02 OrthoFinder output from all 47 species
GSVIVT01011333001 SLO1 Pentatricopeptide repeat-containing protein At1g08070,... 0.03 OrthoFinder output from all 47 species
GSVIVT01012461001 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
GSVIVT01017996001 No alias Pentatricopeptide repeat-containing protein At4g14820... 0.06 OrthoFinder output from all 47 species
GSVIVT01021023001 No alias RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
GSVIVT01021246001 DOT4 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
GSVIVT01022208001 No alias Pentatricopeptide repeat-containing protein At4g19191,... 0.03 OrthoFinder output from all 47 species
GSVIVT01023971001 No alias Pentatricopeptide repeat-containing protein At4g35130,... 0.04 OrthoFinder output from all 47 species
GSVIVT01026141001 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.03 OrthoFinder output from all 47 species
GSVIVT01037944001 No alias Pentatricopeptide repeat-containing protein At1g50270... 0.02 OrthoFinder output from all 47 species
Gb_00846 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.02 OrthoFinder output from all 47 species
Gb_03570 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Gb_23320 CRR22 RNA editing factor (OTP82) 0.03 OrthoFinder output from all 47 species
Gb_26816 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
LOC_Os01g01115.1 LOC_Os01g01115 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os01g10800.1 DOT4, LOC_Os01g10800 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
LOC_Os02g50280.1 CRR22, LOC_Os02g50280 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
LOC_Os03g04390.1 LOC_Os03g04390 Pentatricopeptide repeat-containing protein At4g35130,... 0.02 OrthoFinder output from all 47 species
LOC_Os03g59264.1 LOC_Os03g59264 lectin chaperone (CRT) 0.06 OrthoFinder output from all 47 species
LOC_Os04g35610.1 LOC_Os04g35610 RNA editing factor (SLO2) 0.03 OrthoFinder output from all 47 species
LOC_Os04g39410.1 OTP86, LOC_Os04g39410 RNA editing factor (OTP86) 0.06 OrthoFinder output from all 47 species
LOC_Os05g38190.2 LOC_Os05g38190 Pentatricopeptide repeat-containing protein At2g27610... 0.02 OrthoFinder output from all 47 species
LOC_Os05g49920.1 VAC1, ECB2,... RNA editing factor (ECB2/VAC1) 0.03 OrthoFinder output from all 47 species
LOC_Os05g50950.1 LOC_Os05g50950 Pentatricopeptide repeat-containing protein At4g01030,... 0.05 OrthoFinder output from all 47 species
LOC_Os06g29800.1 LOC_Os06g29800 Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
LOC_Os07g20420.1 LOC_Os07g20420 Pentatricopeptide repeat-containing protein At3g26782,... 0.02 OrthoFinder output from all 47 species
LOC_Os08g04400.1 LOC_Os08g04400 Pentatricopeptide repeat-containing protein At5g50390,... 0.02 OrthoFinder output from all 47 species
LOC_Os08g05750.1 LOC_Os08g05750 Pentatricopeptide repeat-containing protein At4g16835,... 0.02 OrthoFinder output from all 47 species
Len_g03293 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g03890 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g05347 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g05403 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g07979 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g15615 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17531 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18567 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18973 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18990 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g19014 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g19583 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g20435 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g22919 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g25958 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g28725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g33776 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g44429 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g58768 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06708 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07419 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33311 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_141034g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.03 OrthoFinder output from all 47 species
MA_27138g0010 No alias RNA editing factor (MEF7) 0.03 OrthoFinder output from all 47 species
MA_36655g0010 No alias Pentatricopeptide repeat-containing protein At4g39530... 0.03 OrthoFinder output from all 47 species
MA_445207g0010 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.02 OrthoFinder output from all 47 species
MA_5858185g0010 No alias Pentatricopeptide repeat-containing protein At4g30700... 0.02 OrthoFinder output from all 47 species
Msp_g03905 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g17470 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g20820 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g20955 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26664 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g28092 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g41100 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g41204 No alias ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g41356 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g41405 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g43591 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g44335 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g44357 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g46118 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g48606 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g06702 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g08298 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g16442 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g16471 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g27636 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g36314 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g44663 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g02390 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03052 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g05576 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g06420 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g09876 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g34092 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g41725 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g45078 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12230 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g40819 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g51837 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57196 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57713 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57988 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g04436 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05632 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05882 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06373 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g12807 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g17845 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g22239 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29449 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29654 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g30840 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31859 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g35775 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g49219 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53384 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53982 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g56302 EMB2261 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61597 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001819 OTP86 not classified & original description: CDS=1-3381 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g002988 No alias not classified & original description: CDS=1-2412 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004479 No alias not classified & original description: CDS=197-3106 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007046 No alias not classified & original description: CDS=1-2853 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0028.g009863 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2568 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0049.g013742 No alias not classified & original description: CDS=160-2310 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0075.g017370 No alias not classified & original description: CDS=72-2741 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0099.g019544 OSB3 ssDNA-binding protein *(OSB) & original description: CDS=30-812 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0140.g022681 OTP82 not classified & original description: CDS=1-954 0.03 OrthoFinder output from all 47 species
Sam_g01747 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g02933 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g09072 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g10477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g14044 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g15563 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16320 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17245 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g19460 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g19790 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g22188 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27190 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27497 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g28579 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g33428 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g34646 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35987 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37186 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38738 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38908 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39953 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo101455 CRR22 Pentatricopeptide repeat-containing protein At1g08070,... 0.02 OrthoFinder output from all 47 species
Solyc01g007850.2.1 Solyc01g007850 Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Solyc01g095690.2.1 Solyc01g095690 Pentatricopeptide repeat-containing protein At4g01030,... 0.03 OrthoFinder output from all 47 species
Solyc01g098150.3.1 emb1899, EMB175,... Pentatricopeptide repeat-containing protein At5g03800... 0.02 OrthoFinder output from all 47 species
Solyc03g119950.1.1 VAC1, ECB2,... RNA editing factor (ECB2/VAC1) 0.02 OrthoFinder output from all 47 species
Solyc05g013200.1.1 OTP85, Solyc05g013200 RNA editing factor (OTP85) 0.03 OrthoFinder output from all 47 species
Solyc06g062610.2.1 Solyc06g062610 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Solyc08g013850.1.1 CRR21, Solyc08g013850 RNA editing factor (CRR21) 0.03 OrthoFinder output from all 47 species
Solyc11g017370.3.1 Solyc11g017370 RNA editing factor (AEF1) 0.04 OrthoFinder output from all 47 species
Spa_g08436 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g18963 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05598 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06463 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11463 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g14871 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g17888 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g23272 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g30430 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g35682 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g46234 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000301_P001 Zm00001e000301 Pentatricopeptide repeat-containing protein At4g35130,... 0.03 OrthoFinder output from all 47 species
Zm00001e001007_P001 Zm00001e001007 Putative pentatricopeptide repeat-containing protein... 0.01 OrthoFinder output from all 47 species
Zm00001e015695_P001 Zm00001e015695 Pentatricopeptide repeat-containing protein At4g16835,... 0.02 OrthoFinder output from all 47 species
Zm00001e030605_P001 Zm00001e030605 Pentatricopeptide repeat-containing protein At1g31430... 0.02 OrthoFinder output from all 47 species
Zm00001e034478_P001 Zm00001e034478 Pentatricopeptide repeat-containing protein At3g24000,... 0.02 OrthoFinder output from all 47 species
Zm00001e039026_P001 OTP82, Zm00001e039026 Pentatricopeptide repeat-containing protein At5g48910... 0.03 OrthoFinder output from all 47 species
Zm00001e039394_P003 Zm00001e039394 Pentatricopeptide repeat-containing protein At5g04780,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004820 glycine-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006426 glycyl-tRNA aminoacylation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 451 477
IPR002885 Pentatricopeptide_repeat 554 574
IPR002885 Pentatricopeptide_repeat 251 275
IPR002885 Pentatricopeptide_repeat 481 511
IPR002885 Pentatricopeptide_repeat 150 172
IPR002885 Pentatricopeptide_repeat 278 324
IPR002885 Pentatricopeptide_repeat 378 424
IPR002885 Pentatricopeptide_repeat 580 627
IPR002885 Pentatricopeptide_repeat 176 224
IPR002885 Pentatricopeptide_repeat 75 121
No external refs found!