1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00004p00163660

AMTR_s00004p00163660 (SSL3,...)


Aliases : SSL3, evm_27.TU.AmTr_v1.0_scaffold00004.180

Description : Enzyme classification.EC_4 lyases.EC_4.3 carbon-nitrogen lyase


Gene families : OG0000347 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000347_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00004p00163660

Target Alias Description ECC score Gene Family Method Actions
Lfl_g01011 No alias EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g02006 SSL3 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA Interproscan
MF GO:0016844 strictosidine synthase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004221 obsolete ubiquitin thiolesterase activity IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR018119 Strictosidine_synth_cons-reg 180 266
No external refs found!