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  5. AMTR_s00004p00174320

AMTR_s00004p00174320 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00004.199

No description available


Gene families : OG0000231 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000231_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00004p00174320
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00078200 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00106p00050320 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT1G10880 No alias Core-2/I-branching... 0.03 OrthoFinder output from all 47 species
AT1G73810 No alias Core-2/I-branching... 0.04 OrthoFinder output from all 47 species
AT5G16170 No alias Core-2/I-branching... 0.04 OrthoFinder output from all 47 species
AT5G25330 No alias Core-2/I-branching... 0.03 OrthoFinder output from all 47 species
Adi_g097183 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g01144 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g33624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06186 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g32266 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01597 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g42004 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19106.t1 Aspi01Gene19106 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene47321.t1 Aspi01Gene47321 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g40873 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g76791 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.18G049800.1 Ceric.18G049800 not classified & original description: pacid=50621711... 0.03 OrthoFinder output from all 47 species
Dac_g16579 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g45847 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01010878001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01011858001 No alias No description available 0.04 OrthoFinder output from all 47 species
LOC_Os01g65490.1 LOC_Os01g65490 no description available(sp|q65xs5|bc10_orysj : 178.0) 0.02 OrthoFinder output from all 47 species
LOC_Os02g22160.1 LOC_Os02g22160 no description available(sp|q65xs5|bc10_orysj : 129.0) 0.05 OrthoFinder output from all 47 species
LOC_Os12g43880.1 LOC_Os12g43880 no description available(sp|q65xs5|bc10_orysj : 149.0) 0.07 OrthoFinder output from all 47 species
Len_g13455 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07289 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_112910g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_112910g0020 No alias no description available(sp|q65xs5|bc10_orysj : 127.0) 0.03 OrthoFinder output from all 47 species
MA_11883g0010 No alias no description available(sp|q65xs5|bc10_orysj : 160.0) 0.02 OrthoFinder output from all 47 species
MA_28957g0010 No alias no description available(sp|q65xs5|bc10_orysj : 129.0) 0.02 OrthoFinder output from all 47 species
MA_4521g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp4g07380.1 No alias no description available(sp|q65xs5|bc10_orysj : 118.0) 0.02 OrthoFinder output from all 47 species
Mp4g14550.1 No alias no description available(sp|q65xs5|bc10_orysj : 182.0) 0.02 OrthoFinder output from all 47 species
Mp8g00500.1 No alias no description available(sp|q65xs5|bc10_orysj : 112.0) 0.02 OrthoFinder output from all 47 species
Mp8g13670.1 No alias no description available(sp|q65xs5|bc10_orysj : 104.0) 0.05 OrthoFinder output from all 47 species
Msp_g39137 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g17537 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c6_8790V3.1 Pp3c6_8790 Core-2/I-branching... 0.02 OrthoFinder output from all 47 species
Pp3c8_11360V3.1 Pp3c8_11360 Core-2/I-branching... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006751 No alias not classified & original description: CDS=1-447 0.02 OrthoFinder output from all 47 species
Smo102845 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc02g086550.3.1 Solyc02g086550 no description available(sp|q65xs5|bc10_orysj : 491.0) 0.03 OrthoFinder output from all 47 species
Solyc11g071850.1.1 Solyc11g071850 no description available(sp|q65xs5|bc10_orysj : 88.6) 0.02 OrthoFinder output from all 47 species
Tin_g02721 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e003261_P001 Zm00001e003261 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Zm00001e014285_P001 Zm00001e014285 no description available(sp|q65xs5|bc10_orysj : 122.0) 0.03 OrthoFinder output from all 47 species
Zm00001e017911_P002 Zm00001e017911 no description available(sp|q65xs5|bc10_orysj : 157.0) 0.02 OrthoFinder output from all 47 species
Zm00001e024826_P001 Zm00001e024826 no description available(sp|q65xs5|bc10_orysj : 127.0) 0.05 OrthoFinder output from all 47 species
Zm00001e025751_P001 Zm00001e025751 no description available(sp|q65xs5|bc10_orysj : 124.0) 0.03 OrthoFinder output from all 47 species
Zm00001e032837_P001 Zm00001e032837 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e040053_P001 Zm00001e040053 no description available(sp|q65xs5|bc10_orysj : 165.0) 0.03 OrthoFinder output from all 47 species
Zm00001e042023_P001 Zm00001e042023 no description available(sp|q65xs5|bc10_orysj : 163.0) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008375 acetylglucosaminyltransferase activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR003406 Glyco_trans_14 77 318
No external refs found!