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  5. AMTR_s00004p00261790

AMTR_s00004p00261790 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00004.257

Description : Protein yippee-like At5g53940 OS=Arabidopsis thaliana


Gene families : OG0000369 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000369_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00004p00261790
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0004.g008495 No alias not classified & original description: CDS=481-840 0.03 OrthoFinder output from all 47 species
Azfi_s0373.g067187 No alias not classified & original description: CDS=142-573 0.04 OrthoFinder output from all 47 species
GSVIVT01032841001 No alias Protein yippee-like OS=Solanum tuberosum 0.02 OrthoFinder output from all 47 species
Mp4g11690.1 No alias Protein yippee-like At5g53940 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Pnu_g17368 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g14968 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g096130.2.1 Solyc03g096130 Protein yippee-like OS=Solanum tuberosum... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006450 regulation of translational fidelity IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
MF GO:0070003 threonine-type peptidase activity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR004910 Yippee/Mis18/Cereblon 3 106
No external refs found!