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  5. AMTR_s00005p00255540

AMTR_s00005p00255540 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00005.174

Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor


Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00005p00255540

Target Alias Description ECC score Gene Family Method Actions
Aev_g10642 LRL1 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g16212 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g29567 CIB5 regulatory protein (CIB) of blue light perception &... 0.05 OrthoFinder output from all 47 species
Aspi01Gene04163.t1 Aspi01Gene04163 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g44419 RSL2 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.16G038400.1 Ceric.16G038400 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ehy_g13825 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os06g09370.2 LRL3, LOC_Os06g09370 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os11g41640.1 RSL4, LOC_Os11g41640 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
LOC_Os12g40590.1 SPT, LOC_Os12g40590 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Msp_g26514 No alias bHLH-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g28847 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Solyc02g070880.1.1 Solyc02g070880 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Spa_g40384 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011598 bHLH_dom 34 57
No external refs found!