AMTR_s00005p00268890 (ATMYB4, MYB4,...)


Aliases : ATMYB4, MYB4, evm_27.TU.AmTr_v1.0_scaffold00005.249

Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor


Gene families : OG0000015 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00005p00268890

Target Alias Description ECC score Gene Family Method Actions
AT2G36890 ATMYB38, MYB38,... Duplicated homeodomain-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G57620 MYB36, AtMYB36 myb domain protein 36 0.05 OrthoFinder output from all 47 species
Als_g32240 ATMYB120, MYB120 MYB class-R2R3 subgroup-18 transcription factor &... 0.02 OrthoFinder output from all 47 species
Ehy_g15581 ATMIXTA, MYB16, ATMYB16 MYB class-R2R3 subgroup-2 transcription factor &... 0.02 OrthoFinder output from all 47 species
GSVIVT01016800001 MYB26, ATMYB26, MS35 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01027182001 PFG3, ATMYB111, MYB111 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01029904001 MYB60, AtMYB60 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
Gb_02422 ATMIXTA, MYB16, ATMYB16 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Gb_13117 AtMYB93, MYB93 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os08g33940.1 MYBCOV1, MYB96,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os11g03440.1 MYB60, AtMYB60,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Lfl_g22091 ATMYB61, MYB61 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10426901g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10433651g0010 MYB3, ATMYB3 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
MA_129382g0010 ATMYB5, MYB5 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
MA_14452g0010 MYB7, ATY49, ATMYB7 transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
MA_45091g0010 MYB3, ATMYB3 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
MA_460508g0010 ATMYB14, MYB14, MYB14AT transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
MA_499305g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_7032764g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_80033g0010 MYB84, RAX3, ATMYB84 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
MA_8147g0020 MYB3, ATMYB3 transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
MA_8464929g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_9818613g0010 MYB3, ATMYB3 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Nbi_g32592 ATMYB46, MYB46 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g23759 ATY53, ATMYB67, MYB67 MYB class-R2R3 subgroup-13 transcription factor &... 0.03 OrthoFinder output from all 47 species
Pir_g41293 MYB7, ATY49, ATMYB7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06480 ATMIXTA, MYB16, ATMYB16 transcriptional regulator *(TDF1) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e026426_P001 MYB86, ATMYB86,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e040265_P001 MYB103,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0005622 intracellular anatomical structure IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 13 60
IPR001005 SANT/Myb 66 111
No external refs found!