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  5. AMTR_s00006p00245830

AMTR_s00006p00245830 (FLA2,...)


Aliases : FLA2, evm_27.TU.AmTr_v1.0_scaffold00006.127

Description : Cell wall.cell wall proteins.hydroxyproline-rich glycoproteins.arabinogalactan proteins (AGPs).glycoproteins.fasciclin-type arabinogalactan protein


Gene families : OG0000786 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000786_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00006p00245830

Target Alias Description ECC score Gene Family Method Actions
AT4G12730 FLA2 FASCICLIN-like arabinogalactan 2 0.04 OrthoFinder output from all 47 species
Aev_g20247 SOS5 regulatory factor SOS5 of SOS *(Salt Overly Sensitive)... 0.02 OrthoFinder output from all 47 species
Ehy_g08244 SOS5 Fasciclin-type arabinogalactan protein & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01014684001 FLA1 Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
Gb_05461 No alias fasciclin-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Gb_27317 SOS5 fasciclin-type arabinogalactan protein. regulatory... 0.02 OrthoFinder output from all 47 species
LOC_Os01g62380.1 SOS5, LOC_Os01g62380 fasciclin-type arabinogalactan protein. regulatory... 0.02 OrthoFinder output from all 47 species
LOC_Os05g38500.1 SOS5, LOC_Os05g38500 fasciclin-type arabinogalactan protein. regulatory... 0.03 OrthoFinder output from all 47 species
Mp5g10880.1 SOS5 fasciclin-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Msp_g05838 FLA10 Fasciclin-type arabinogalactan protein & original... 0.02 OrthoFinder output from all 47 species
Smo55113 FLA10 Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 OrthoFinder output from all 47 species
Solyc01g091530.4.1 FLA10, Solyc01g091530 classical arabinogalactan protein. fasciclin-type... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000782 FAS1_domain 194 322
IPR000782 FAS1_domain 32 126
No external refs found!