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  5. AMTR_s00006p00248860

AMTR_s00006p00248860 (TMO6,...)


Aliases : TMO6, evm_27.TU.AmTr_v1.0_scaffold00006.141

Description : RNA biosynthesis.transcriptional activation.C2C2 superfamily.DOF transcription factor


Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00006p00248860

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00160p00053540 DOF4.7,... RNA biosynthesis.transcriptional activation.C2C2... 0.01 OrthoFinder output from all 47 species
AT1G21340 No alias Dof-type zinc finger DNA-binding family protein 0.03 OrthoFinder output from all 47 species
AT1G26790 No alias Dof-type zinc finger DNA-binding family protein 0.03 OrthoFinder output from all 47 species
AT1G29160 No alias Dof-type zinc finger DNA-binding family protein 0.03 OrthoFinder output from all 47 species
AT2G34140 No alias Dof-type zinc finger DNA-binding family protein 0.05 OrthoFinder output from all 47 species
AT3G21270 ADOF2, DOF2 DOF zinc finger protein 2 0.03 OrthoFinder output from all 47 species
AT3G45610 No alias Dof-type zinc finger DNA-binding family protein 0.02 OrthoFinder output from all 47 species
AT3G55370 OBP3 OBF-binding protein 3 0.03 OrthoFinder output from all 47 species
AT3G61850 DAG1 Dof-type zinc finger DNA-binding family protein 0.02 OrthoFinder output from all 47 species
AT4G00940 No alias Dof-type zinc finger DNA-binding family protein 0.04 OrthoFinder output from all 47 species
AT4G24060 No alias Dof-type zinc finger DNA-binding family protein 0.03 OrthoFinder output from all 47 species
AT5G60200 TMO6 TARGET OF MONOPTEROS 6 0.03 OrthoFinder output from all 47 species
AT5G60850 OBP4 OBF binding protein 4 0.02 OrthoFinder output from all 47 species
AT5G65590 No alias Dof-type zinc finger DNA-binding family protein 0.03 OrthoFinder output from all 47 species
Adi_g016055 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g022624 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g041204 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g078152 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g079893 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g106333 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g04769 OBP4 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g39679 CDF1 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g13677 CDF2 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g18800 CDF3 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g27970 OBP3 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g04849 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g11020 CDF2 transcription factor *(DOF) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g18462 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g20563 ADOF1, DOF1 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g39186 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08641 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09379 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11337 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g18797 OBP3 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g25388 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g36307 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g67430 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene13553.t1 CDF3, Aspi01Gene13553 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene47016.t1 CDF2, Aspi01Gene47016 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0008.g011464 No alias not classified & original description: CDS=1-2679 0.02 OrthoFinder output from all 47 species
Azfi_s0054.g033832 CDF3 transcription factor *(DOF) & original description: CDS=354-1853 0.03 OrthoFinder output from all 47 species
Azfi_s0166.g054389 TMO6 transcription factor *(DOF) & original description: CDS=1-1341 0.01 OrthoFinder output from all 47 species
Azfi_s1074.g096912 TMO6 transcription factor *(DOF) & original description: CDS=1-1176 0.04 OrthoFinder output from all 47 species
Cba_g06470 CDF2 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g24216 ADOF1, DOF1 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29247 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.11G069300.1 TMO6, Ceric.11G069300 transcription factor *(DOF) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.12G042700.1 TMO6, Ceric.12G042700 transcription factor *(DOF) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.14G083700.1 OBP4, Ceric.14G083700 transcription factor *(DOF) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.19G053600.1 ADOF1, DOF1,... transcription factor *(DOF) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.34G056200.1 Ceric.34G056200 transcription factor *(DOF) & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g04621 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05583 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g31456 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g05737 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g01245 CDF1 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04770 CDF3 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13892 OBP1 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26661 No alias transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g26839 CDF1 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g27889 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g28279 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01007992001 CDF1 RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
GSVIVT01019619001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
GSVIVT01019969001 CDF1 RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
GSVIVT01029943001 CDF3 RNA biosynthesis.transcriptional activation.C2C2... 0.01 OrthoFinder output from all 47 species
GSVIVT01034189001 OBP3 RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
Gb_07177 CDF2 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Gb_20867 CDF3 Cyclic dof factor 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os02g15350.1 LOC_Os02g15350 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
LOC_Os03g16850.1 OBP3, LOC_Os03g16850 transcription factor (DOF) 0.06 OrthoFinder output from all 47 species
LOC_Os04g58190.1 LOC_Os04g58190 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
LOC_Os05g02150.1 OBP3, LOC_Os05g02150 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
LOC_Os07g13260.1 OBP3, LOC_Os07g13260 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
LOC_Os07g32510.1 TMO6, LOC_Os07g32510 transcription factor (DOF) 0.05 OrthoFinder output from all 47 species
LOC_Os07g48570.1 CDF2, LOC_Os07g48570 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
LOC_Os08g38220.1 LOC_Os08g38220 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Len_g13353 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g14310 OBP3 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19257 OBP3 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g01681 CDF2 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g16402 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g26281 OBP4 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
MA_16692g0010 TMO6 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
MA_2430g0010 CDF3 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_83624g0010 TMO6 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Msp_g11078 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g15852 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g45088 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38953 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g05846 TMO6 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g06748 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g25217 OBP4 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30866 CDF3 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g32243 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33990 TMO6 transcription factor *(DOF) & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g01905 DOF2.4, ATDOF2.4 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g46596 HCA2, DOF5.6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g11813 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g18788 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g26562 CDF2 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03743 ADOF1, DOF1 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09266 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g11469 ADOF1, DOF1 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g17795 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61204 OBP4 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012148 ADOF1, DOF1 transcription factor *(DOF) & original description: CDS=1-1128 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013517 CDF3 transcription factor *(DOF) & original description: CDS=154-1659 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0148.g023228 No alias transcription factor *(DOF) & original description: CDS=1-1353 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0279.g027089 ADOF1, DOF1 transcription factor *(DOF) & original description: CDS=1-1056 0.03 OrthoFinder output from all 47 species
Sam_g43145 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g49468 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g067230.3.1 CDF2, Solyc02g067230 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Solyc02g076850.2.1 Solyc02g076850 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Solyc02g077950.3.1 Solyc02g077950 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Solyc02g078620.1.1 ADOF2, DOF2,... transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Solyc02g088070.3.1 CDF3, Solyc02g088070 transcription factor (DOF) 0.01 OrthoFinder output from all 47 species
Solyc02g090220.3.1 OBP1, Solyc02g090220 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Solyc03g082840.3.1 DAG1, Solyc03g082840 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Solyc03g112930.3.1 HCA2, DOF5.6,... transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Solyc03g121400.1.1 ADOF2, DOF2,... transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Solyc04g070960.3.1 Solyc04g070960 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Solyc05g007880.4.1 CDF1, Solyc05g007880 Cyclic dof factor 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc06g062520.1.1 ADOF1, DOF1,... transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Solyc06g069760.3.1 CDF3, Solyc06g069760 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Solyc06g076030.3.1 Solyc06g076030 transcription factor (DOF) 0.05 OrthoFinder output from all 47 species
Solyc06g150130.1.1 OBP4, Solyc06g150130 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Solyc10g009360.4.1 DAG1, Solyc10g009360 transcription factor (DOF) 0.05 OrthoFinder output from all 47 species
Solyc11g010940.2.1 Solyc11g010940 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Spa_g02206 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g31006 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g32905 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g54524 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19759 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20763 CDF3 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23610 TMO6 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e000526_P001 CDF3, Zm00001e000526 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e001988_P001 TMO6, Zm00001e001988 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e002951_P002 Zm00001e002951 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e004476_P002 Zm00001e004476 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Zm00001e004809_P001 CDF3, Zm00001e004809 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e005785_P001 ADOF2, DOF2,... transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e006527_P001 Zm00001e006527 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e010454_P001 TMO6, Zm00001e010454 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e011750_P002 Zm00001e011750 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e012824_P001 CDF1, Zm00001e012824 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e015414_P004 Zm00001e015414 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e019172_P001 Zm00001e019172 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e023218_P004 Zm00001e023218 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e028042_P002 Zm00001e028042 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e028672_P001 Zm00001e028672 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e029641_P001 OBP3, Zm00001e029641 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e031750_P001 Zm00001e031750 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Zm00001e034454_P001 ADOF1, DOF1,... transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e035892_P001 CDF2, Zm00001e035892 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006810 transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR003851 Znf_Dof 36 97
No external refs found!