AMTR_s00007p00181450 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00007.144

Description : Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCG transporter


Gene families : OG0000888 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000888_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00007p00181450

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00031p00236610 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
AMTR_s00060p00208620 evm_27.TU.AmTr_v1... External stimuli response.biotic... 0.05 OrthoFinder output from all 47 species
AT1G53270 No alias ABC-2 type transporter family protein 0.03 OrthoFinder output from all 47 species
AT2G37360 No alias ABC-2 type transporter family protein 0.02 OrthoFinder output from all 47 species
AT3G53510 No alias ABC-2 type transporter family protein 0.03 OrthoFinder output from all 47 species
AT3G55090 No alias ABC-2 type transporter family protein 0.03 OrthoFinder output from all 47 species
AT3G55110 No alias ABC-2 type transporter family protein 0.05 OrthoFinder output from all 47 species
AT3G55130 WBC19, ATWBC19 white-brown complex homolog 19 0.03 OrthoFinder output from all 47 species
AT4G25750 No alias ABC-2 type transporter family protein 0.04 OrthoFinder output from all 47 species
AT5G13580 No alias ABC-2 type transporter family protein 0.02 OrthoFinder output from all 47 species
AT5G19410 No alias ABC-2 type transporter family protein 0.05 OrthoFinder output from all 47 species
AT5G52860 No alias ABC-2 type transporter family protein 0.04 OrthoFinder output from all 47 species
Ala_g23786 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Als_g14907 No alias subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g32906 WBC19, ATWBC19 ABC-G-type lipid transporter *(STR) & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g36964 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene05499.t1 Aspi01Gene05499 subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene07578.t1 Aspi01Gene07578 subfamily ABCG transporter & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0001.g000828 No alias subfamily ABCG transporter & original description: CDS=1-2274 0.03 OrthoFinder output from all 47 species
Azfi_s0014.g013525 No alias subfamily ABCG transporter & original description: CDS=189-2225 0.03 OrthoFinder output from all 47 species
Azfi_s0120.g046757 No alias subfamily ABCG transporter & original description: CDS=1-2250 0.03 OrthoFinder output from all 47 species
Cba_g03340 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06245 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07276 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.14G055400.1 Ceric.14G055400 subfamily ABCG transporter & original description:... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021068.3 ABCG26, WBC27 ABC transporter G family member 26 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dac_g23513 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g34793 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g38683 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g04073 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g10068 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g25458 WBC19, ATWBC19 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g25490 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g28101 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01014222001 No alias ABC transporter G family member 10 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01022346001 No alias ABC transporter G family member 5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01025582001 No alias Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
GSVIVT01032625001 No alias Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
GSVIVT01037274001 No alias Solute transport.primary active transport.ABC... 0.05 OrthoFinder output from all 47 species
Gb_20468 No alias subfamily ABCG transporter 0.08 OrthoFinder output from all 47 species
Gb_24085 No alias subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species
LOC_Os01g42900.1 LOC_Os01g42900 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
LOC_Os03g17350.1 LOC_Os03g17350 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
LOC_Os05g02890.1 LOC_Os05g02890 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
LOC_Os06g30730.1 LOC_Os06g30730 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Len_g50392 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.1 OrthoFinder output from all 47 species
Lfl_g26422 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g39649 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
MA_103974g0010 No alias ABC transporter G family member 5 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_529254g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp2g07990.1 No alias subfamily ABCG transporter 0.08 OrthoFinder output from all 47 species
Mp3g16700.1 No alias subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species
Mp5g04860.1 No alias subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Mp5g15770.1 No alias subfamily ABCG transporter 0.06 OrthoFinder output from all 47 species
Msp_g13417 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g23417 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g39182 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g43887 WBC19, ATWBC19 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g37386 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g40770 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g22707 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g26286 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26296 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g32502 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g61308 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31857 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Smo88976 No alias Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Solyc03g007690.1.1 Solyc03g007690 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Solyc03g113690.1.1 Solyc03g113690 subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species
Solyc05g054890.4.1 Solyc05g054890 subfamily ABCG transporter 0.06 OrthoFinder output from all 47 species
Solyc09g005970.1.1 Solyc09g005970 subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Spa_g10980 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g29782 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g41222 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g40098 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g40276 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e001269_P001 Zm00001e001269 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Zm00001e019365_P001 Zm00001e019365 subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Zm00001e020697_P001 Zm00001e020697 subfamily ABCG transporter 0.01 OrthoFinder output from all 47 species
Zm00001e031556_P001 Zm00001e031556 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Zm00001e036158_P002 Zm00001e036158 subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004888 transmembrane signaling receptor activity IEP HCCA
MF GO:0004970 ionotropic glutamate receptor activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005230 extracellular ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0005231 excitatory extracellular ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0005234 extracellularly glutamate-gated ion channel activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006855 xenobiotic transmembrane transport IEP HCCA
MF GO:0008066 glutamate receptor activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0009116 nucleoside metabolic process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022824 transmitter-gated monoatomic ion channel activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022835 transmitter-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
CC GO:0030288 outer membrane-bounded periplasmic space IEP HCCA
MF GO:0030594 neurotransmitter receptor activity IEP HCCA
MF GO:0038023 signaling receptor activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
CC GO:0042597 periplasmic space IEP HCCA
BP GO:0042908 xenobiotic transport IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 147 275
IPR013525 ABC_2_trans 438 647
No external refs found!