1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00007p00257060

AMTR_s00007p00257060 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00007.306

No description available


Gene families : OG0004676 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004676_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00007p00257060

Target Alias Description ECC score Gene Family Method Actions
LOC_Os05g05740.1 LOC_Os05g05740 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_10118613g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002597 No alias not classified & original description: CDS=60-692 0.02 OrthoFinder output from all 47 species
Solyc02g080940.3.1 Solyc02g080940 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005779 obsolete integral component of peroxisomal membrane IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007031 peroxisome organization IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR001608 Ala_racemase_N 14 237
No external refs found!