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  5. AMTR_s00009p00215930

AMTR_s00009p00215930 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00009.151

Description : Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00009p00215930

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00138570 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
AMTR_s00009p00215900 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g14820... 0.03 OrthoFinder output from all 47 species
AMTR_s00010p00217860 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g13650... 0.05 OrthoFinder output from all 47 species
AMTR_s00010p00260120 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g74600,... 0.03 OrthoFinder output from all 47 species
AMTR_s00016p00252350 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g22690... 0.07 OrthoFinder output from all 47 species
AMTR_s00061p00035580 No alias Pentatricopeptide repeat-containing protein At5g44230... 0.06 OrthoFinder output from all 47 species
AMTR_s00086p00063190 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g21065... 0.05 OrthoFinder output from all 47 species
AMTR_s00095p00039180 OTP86,... Pentatricopeptide repeat-containing protein At3g63370,... 0.04 OrthoFinder output from all 47 species
AMTR_s00177p00030580 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g12770... 0.04 OrthoFinder output from all 47 species
Aspi01Gene43851.t1 Aspi01Gene43851 not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 15 37
IPR002885 Pentatricopeptide_repeat 41 71
No external refs found!