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  5. AMTR_s00010p00131320

AMTR_s00010p00131320 (CRR23,...)


Aliases : CRR23, evm_27.TU.AmTr_v1.0_scaffold00010.88

Description : Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.subcomplex A.NdhL component


Gene families : OG0008657 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008657_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00010p00131320

Target Alias Description ECC score Gene Family Method Actions
AT1G70760 CRR23 inorganic carbon transport protein-related 0.14 OrthoFinder output from all 47 species
Aev_g23650 CRR23 component *(NdhL) of NDH subcomplex A & original... 0.02 OrthoFinder output from all 47 species
Ala_g00468 CRR23 component *(NdhL) of NDH subcomplex A & original... 0.11 OrthoFinder output from all 47 species
Als_g54685 CRR23 component *(NdhL) of NDH subcomplex A & original... 0.04 OrthoFinder output from all 47 species
Aob_g02917 CRR23 component *(NdhL) of NDH subcomplex A & original... 0.02 OrthoFinder output from all 47 species
Aop_g25170 CRR23 component *(NdhL) of NDH subcomplex A & original... 0.1 OrthoFinder output from all 47 species
Aspi01Gene04984.t1 Aspi01Gene04984 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0309.g064103 CRR23 component *(NdhL) of NDH subcomplex A & original... 0.07 OrthoFinder output from all 47 species
Ceric.13G073600.1 Ceric.13G073600 component *(NdhL) of NDH subcomplex A & original... 0.04 OrthoFinder output from all 47 species
Dac_g10478 CRR23 component *(NdhL) of NDH subcomplex A & original... 0.03 OrthoFinder output from all 47 species
Dcu_g14859 CRR23 component *(NdhL) of NDH subcomplex A & original... 0.02 OrthoFinder output from all 47 species
Dde_g02573 CRR23 component *(NdhL) of NDH subcomplex A & original... 0.06 OrthoFinder output from all 47 species
Ehy_g19054 CRR23 component *(NdhL) of NDH subcomplex A & original... 0.09 OrthoFinder output from all 47 species
GSVIVT01011707001 CRR23 Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.04 OrthoFinder output from all 47 species
Gb_39991 CRR23 component NdhL of NDH subcomplex A 0.09 OrthoFinder output from all 47 species
LOC_Os05g28090.1 CRR23, LOC_Os05g28090 component NdhL of NDH subcomplex A 0.03 OrthoFinder output from all 47 species
Len_g00335 CRR23 component *(NdhL) of NDH subcomplex A & original... 0.04 OrthoFinder output from all 47 species
Lfl_g00443 CRR23 component *(NdhL) of NDH subcomplex A & original... 0.02 OrthoFinder output from all 47 species
Msp_g10025 CRR23 component *(NdhL) of NDH subcomplex A & original... 0.04 OrthoFinder output from all 47 species
Nbi_g17587 CRR23 component *(NdhL) of NDH subcomplex A & original... 0.08 OrthoFinder output from all 47 species
Pir_g14684 CRR23 component *(NdhL) of NDH subcomplex A & original... 0.04 OrthoFinder output from all 47 species
Pnu_g04728 CRR23 component *(NdhL) of NDH subcomplex A & original... 0.03 OrthoFinder output from all 47 species
Pp3c24_18490V3.1 CRR23, Pp3c24_18490 inorganic carbon transport protein-related 0.04 OrthoFinder output from all 47 species
Ppi_g06118 CRR23 component *(NdhL) of NDH subcomplex A & original... 0.08 OrthoFinder output from all 47 species
Sam_g09861 No alias component *(NdhL) of NDH subcomplex A & original... 0.02 OrthoFinder output from all 47 species
Solyc05g026550.3.1 CRR23, Solyc05g026550 component NdhL of NDH subcomplex A 0.14 OrthoFinder output from all 47 species
Spa_g12134 No alias component *(NdhL) of NDH subcomplex A & original... 0.02 OrthoFinder output from all 47 species
Zm00001e034098_P001 CRR23, Zm00001e034098 component NdhL of NDH subcomplex A 0.13 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004372 glycine hydroxymethyltransferase activity IEP HCCA
BP GO:0006544 glycine metabolic process IEP HCCA
BP GO:0006563 L-serine metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
MF GO:0009496 plastoquinol--plastocyanin reductase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
MF GO:0019203 carbohydrate phosphatase activity IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
MF GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
MF GO:0048037 obsolete cofactor binding IEP HCCA
MF GO:0050308 sugar-phosphatase activity IEP HCCA
MF GO:0050662 obsolete coenzyme binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0052880 oxidoreductase activity, acting on diphenols and related substances as donors, with copper protein as acceptor IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR019654 NADH-quinone_OxRdatse_su_L 105 176
No external refs found!