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  5. AMTR_s00010p00144270

AMTR_s00010p00144270 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00010.105

Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor


Gene families : OG0001169 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001169_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00010p00144270

Target Alias Description ECC score Gene Family Method Actions
Adi_g033761 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g38947 BHLH32, ATAIG1, TMO5 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.06G073900.1 Ceric.06G073900 bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Dcu_g13418 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011960001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
GSVIVT01020688001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
LOC_Os01g11910.1 LOC_Os01g11910 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Pir_g21895 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g095980.3.1 Solyc03g095980 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Spa_g08576 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08301 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001119_P001 Zm00001e001119 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e016455_P001 BHLH32, ATAIG1,... transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e022445_P001 Zm00001e022445 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e038535_P001 Zm00001e038535 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006801 superoxide metabolic process IEP HCCA
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 187 233
No external refs found!