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  5. AMTR_s00010p00250780

AMTR_s00010p00250780 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00010.356

Description : External stimuli response.biotic stress.pathogen effector.NLR effector receptor


Gene families : OG0000030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00010p00250780

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00273020 evm_27.TU.AmTr_v1... External stimuli response.biotic stress.pathogen... 0.03 OrthoFinder output from all 47 species
AMTR_s00060p00215110 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00085p00122470 No alias External stimuli response.biotic stress.pathogen... 0.03 OrthoFinder output from all 47 species
AT5G17680 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.04 OrthoFinder output from all 47 species
AT5G48770 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
Adi_g019390 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene45502.t1 Aspi01Gene45502 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01020962001 No alias TMV resistance protein N OS=Nicotiana glutinosa 0.01 OrthoFinder output from all 47 species
GSVIVT01020964001 No alias TMV resistance protein N OS=Nicotiana glutinosa 0.01 OrthoFinder output from all 47 species
GSVIVT01036408001 No alias External stimuli response.biotic stress.pathogen... 0.01 OrthoFinder output from all 47 species
MA_10095341g0010 No alias Disease resistance-like protein DSC1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_10430493g0010 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.03 OrthoFinder output from all 47 species
MA_11587g0010 No alias effector receptor (NLR) 0.01 OrthoFinder output from all 47 species
MA_662972g0010 No alias effector receptor (NLR) 0.01 OrthoFinder output from all 47 species
Pir_g29887 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g07542 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g07543 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 701 722
IPR002182 NB-ARC 210 468
IPR000157 TIR_dom 39 149
No external refs found!